Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 AC243591.1-201ENST00000452967 1364 ntBASIC16.4■□□□□ 0.22
UBE2E3Q969T4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.4■□□□□ 0.22
UBE2E3Q969T4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 AC005915.1-201ENST00000624912 2018 ntBASIC16.4■□□□□ 0.22
UBE2E3Q969T4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
UBE2E3Q969T4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
UBE2E3Q969T4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
UBE2E3Q969T4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
UBE2E3Q969T4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
UBE2E3Q969T4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.39■□□□□ 0.21
UBE2E3Q969T4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 AC025062.2-201ENST00000605477 670 ntBASIC16.39■□□□□ 0.21
UBE2E3Q969T4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 AC107918.4-202ENST00000641623 219 ntBASIC16.39■□□□□ 0.21
UBE2E3Q969T4 AF228730.7-201ENST00000641842 219 ntBASIC16.39■□□□□ 0.21
UBE2E3Q969T4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2E3Q969T4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
UBE2E3Q969T4 AL121912.1-201ENST00000603683 238 ntBASIC16.38■□□□□ 0.21
UBE2E3Q969T4 AL691432.3-201ENST00000621860 400 ntBASIC16.38■□□□□ 0.21
UBE2E3Q969T4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms