Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEM35BQ8NCS4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 KRT18P67-201ENST00000432816 1264 ntBASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 AC079781.3-201ENST00000449110 356 ntBASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 PAWRP1-201ENST00000451083 565 ntBASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 AC018712.1-201ENST00000455767 687 ntBASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 AL805961.1-202ENST00000641562 540 ntBASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 AF228730.7-201ENST00000641842 219 ntBASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM35BQ8NCS4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 PCDHB17P-201ENST00000539533 2393 ntBASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 KRT18P27-201ENST00000427733 1299 ntBASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM35BQ8NCS4 PI4KAP1-204ENST00000612579 1703 ntBASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 RPS2P28-201ENST00000314255 741 ntBASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TMEM35BQ8NCS4 AL031008.1-201ENST00000619963 541 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms