Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX5Q8N196 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX5Q8N196 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.42■□□□□ 0.38
SIX5Q8N196 SPDYE22P-201ENST00000582158 798 ntBASIC17.42■□□□□ 0.38
SIX5Q8N196 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX5Q8N196 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.42■□□□□ 0.38
SIX5Q8N196 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
SIX5Q8N196 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX5Q8N196 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.41■□□□□ 0.38
SIX5Q8N196 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.41■□□□□ 0.38
SIX5Q8N196 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
SIX5Q8N196 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SIX5Q8N196 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.41■□□□□ 0.38
SIX5Q8N196 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SIX5Q8N196 COX5BP8-201ENST00000416911 349 ntBASIC17.41■□□□□ 0.38
SIX5Q8N196 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.41■□□□□ 0.38
SIX5Q8N196 AC092580.3-201ENST00000430932 139 ntBASIC17.41■□□□□ 0.38
SIX5Q8N196 AC241585.1-201ENST00000433527 519 ntBASIC17.41■□□□□ 0.38
SIX5Q8N196 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.41■□□□□ 0.38
SIX5Q8N196 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.41■□□□□ 0.38
SIX5Q8N196 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.41■□□□□ 0.38
SIX5Q8N196 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
SIX5Q8N196 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
SIX5Q8N196 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SIX5Q8N196 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SIX5Q8N196 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.41■□□□□ 0.38
SIX5Q8N196 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.41■□□□□ 0.38
SIX5Q8N196 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SIX5Q8N196 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SIX5Q8N196 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIX5Q8N196 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SIX5Q8N196 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.4■□□□□ 0.38
SIX5Q8N196 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.4■□□□□ 0.38
SIX5Q8N196 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SIX5Q8N196 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.4■□□□□ 0.38
SIX5Q8N196 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.4■□□□□ 0.38
SIX5Q8N196 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.4■□□□□ 0.38
SIX5Q8N196 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.4■□□□□ 0.38
SIX5Q8N196 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.4■□□□□ 0.38
SIX5Q8N196 ALG1L8P-201ENST00000533887 760 ntBASIC17.4■□□□□ 0.38
SIX5Q8N196 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.4■□□□□ 0.38
SIX5Q8N196 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.4■□□□□ 0.38
SIX5Q8N196 AC009118.2-201ENST00000613275 655 ntBASIC17.4■□□□□ 0.38
SIX5Q8N196 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.4■□□□□ 0.38
SIX5Q8N196 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SIX5Q8N196 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.4■□□□□ 0.38
SIX5Q8N196 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SIX5Q8N196 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.4■□□□□ 0.38
SIX5Q8N196 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.4■□□□□ 0.38
SIX5Q8N196 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.4■□□□□ 0.38
SIX5Q8N196 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIX5Q8N196 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SIX5Q8N196 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SIX5Q8N196 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIX5Q8N196 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SIX5Q8N196 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.39■□□□□ 0.37
SIX5Q8N196 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms