Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MIR4492-201ENST00000581627 80 ntBASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNAPC4Q5SXM2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 USP32P1-208ENST00000506594 1164 ntBASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 AC123567.1-201ENST00000548294 1261 ntBASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 WFDC1-204ENST00000613603 549 ntBASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 GOLGA2P9-201ENST00000596977 1937 ntBASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC27.4■■□□□ 1.98
SNAPC4Q5SXM2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 MIR1908-201ENST00000410394 80 ntBASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 NME6-203ENST00000415644 849 ntTSL 2 BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 RNA5SP410-201ENST00000516285 106 ntBASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SNAPC4Q5SXM2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SNAPC4Q5SXM2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC27.39■■□□□ 1.97
SNAPC4Q5SXM2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SNAPC4Q5SXM2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SNAPC4Q5SXM2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
SNAPC4Q5SXM2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SNAPC4Q5SXM2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC27.39■■□□□ 1.97
SNAPC4Q5SXM2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 ACTBP11-201ENST00000436287 1126 ntBASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 TPRX2P-201ENST00000535362 881 ntBASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
SNAPC4Q5SXM2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC27.37■■□□□ 1.97
SNAPC4Q5SXM2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms