Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.79□□□□□ -0.2
CX3CL1P78423 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CL1P78423 SPDYE21P-201ENST00000413323 827 ntBASIC13.79□□□□□ -0.2
CX3CL1P78423 RBM17P3-201ENST00000417687 1192 ntBASIC13.79□□□□□ -0.2
CX3CL1P78423 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CL1P78423 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CL1P78423 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CL1P78423 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CL1P78423 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CX3CL1P78423 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CL1P78423 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CL1P78423 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.79□□□□□ -0.2
CX3CL1P78423 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CL1P78423 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CX3CL1P78423 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CX3CL1P78423 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CX3CL1P78423 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CL1P78423 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CL1P78423 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CL1P78423 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CL1P78423 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
CX3CL1P78423 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CX3CL1P78423 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CX3CL1P78423 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CX3CL1P78423 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
CX3CL1P78423 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.78□□□□□ -0.2
CX3CL1P78423 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CX3CL1P78423 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CX3CL1P78423 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CL1P78423 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.78□□□□□ -0.2
CX3CL1P78423 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.78□□□□□ -0.2
CX3CL1P78423 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
CX3CL1P78423 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CX3CL1P78423 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.78□□□□□ -0.2
CX3CL1P78423 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CX3CL1P78423 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.78□□□□□ -0.2
CX3CL1P78423 SIGLEC16-201ENST00000599858 1437 ntBASIC13.78□□□□□ -0.2
CX3CL1P78423 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.78□□□□□ -0.2
CX3CL1P78423 AC079776.2-201ENST00000641154 1609 ntBASIC13.78□□□□□ -0.2
CX3CL1P78423 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 AL135999.2-201ENST00000622438 1686 ntBASIC13.78□□□□□ -0.2
CX3CL1P78423 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CX3CL1P78423 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
CX3CL1P78423 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CX3CL1P78423 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CX3CL1P78423 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CX3CL1P78423 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CX3CL1P78423 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CX3CL1P78423 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CX3CL1P78423 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CX3CL1P78423 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.77□□□□□ -0.2
CX3CL1P78423 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CX3CL1P78423 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CL1P78423 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CX3CL1P78423 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.77□□□□□ -0.21
CX3CL1P78423 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
CX3CL1P78423 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.77□□□□□ -0.21
CX3CL1P78423 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CX3CL1P78423 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms