Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 AC003669.1-201ENST00000334569 611 ntBASIC19.53■□□□□ 0.72
CHMP4BP1P59074 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 RPS15P9-201ENST00000494093 319 ntBASIC19.53■□□□□ 0.72
CHMP4BP1P59074 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 AC027796.2-201ENST00000575326 344 ntBASIC19.53■□□□□ 0.72
CHMP4BP1P59074 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 IGHV3-52-201ENST00000519770 353 ntBASIC19.52■□□□□ 0.72
CHMP4BP1P59074 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 AC019129.2-201ENST00000609837 1235 ntBASIC19.52■□□□□ 0.72
CHMP4BP1P59074 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHMP4BP1P59074 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP4BP1P59074 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP4BP1P59074 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CHMP4BP1P59074 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CHMP4BP1P59074 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.52■□□□□ 0.71
CHMP4BP1P59074 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CHMP4BP1P59074 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 AL078644.1-201ENST00000609881 752 ntBASIC19.51■□□□□ 0.71
CHMP4BP1P59074 AL513190.1-201ENST00000621254 727 ntBASIC19.51■□□□□ 0.71
CHMP4BP1P59074 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHMP4BP1P59074 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP4BP1P59074 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP4BP1P59074 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP4BP1P59074 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.5■□□□□ 0.71
CHMP4BP1P59074 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.5■□□□□ 0.71
CHMP4BP1P59074 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CHMP4BP1P59074 AP001094.4-201ENST00000579008 2176 ntBASIC19.5■□□□□ 0.71
CHMP4BP1P59074 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP4BP1P59074 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHMP4BP1P59074 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms