Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.69□□□□□ -0.38
CMC4P56277 VN2R19P-201ENST00000442399 1052 ntBASIC12.69□□□□□ -0.38
CMC4P56277 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.69□□□□□ -0.38
CMC4P56277 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.69□□□□□ -0.38
CMC4P56277 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
CMC4P56277 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.69□□□□□ -0.38
CMC4P56277 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.69□□□□□ -0.38
CMC4P56277 MIR4751-201ENST00000578027 74 ntBASIC12.69□□□□□ -0.38
CMC4P56277 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.69□□□□□ -0.38
CMC4P56277 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 AC120114.3-201ENST00000611923 658 ntBASIC12.69□□□□□ -0.38
CMC4P56277 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CMC4P56277 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CMC4P56277 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.69□□□□□ -0.38
CMC4P56277 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CMC4P56277 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CMC4P56277 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 AL133373.2-201ENST00000623187 2828 ntBASIC12.68□□□□□ -0.38
CMC4P56277 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CMC4P56277 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 AC087163.2-201ENST00000457299 853 ntBASIC12.68□□□□□ -0.38
CMC4P56277 AC108073.2-201ENST00000464002 357 ntBASIC12.68□□□□□ -0.38
CMC4P56277 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 RNA5SP416-201ENST00000516838 111 ntBASIC12.68□□□□□ -0.38
CMC4P56277 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 AC106730.1-201ENST00000566722 1090 ntBASIC12.68□□□□□ -0.38
CMC4P56277 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 AC091167.2-201ENST00000579581 588 ntBASIC12.68□□□□□ -0.38
CMC4P56277 AL049840.3-201ENST00000602669 611 ntBASIC12.68□□□□□ -0.38
CMC4P56277 AC027601.4-201ENST00000611259 610 ntBASIC12.68□□□□□ -0.38
CMC4P56277 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 AC004790.2-201ENST00000623588 572 ntBASIC12.68□□□□□ -0.38
CMC4P56277 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.68□□□□□ -0.38
CMC4P56277 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CMC4P56277 TOP3BP1-201ENST00000420768 1380 ntBASIC12.68□□□□□ -0.38
CMC4P56277 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CMC4P56277 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CMC4P56277 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CMC4P56277 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CMC4P56277 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.67□□□□□ -0.38
CMC4P56277 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms