Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.94■□□□□ 0.3
NUBP1P53384 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NUBP1P53384 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 NPM1P10-201ENST00000398310 865 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC16.94■□□□□ 0.3
NUBP1P53384 HSFY7P-201ENST00000432672 318 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NUBP1P53384 HSFY8P-201ENST00000437934 318 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.94■□□□□ 0.3
NUBP1P53384 HSFY5P-201ENST00000453726 309 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.94■□□□□ 0.3
NUBP1P53384 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC16.94■□□□□ 0.3
NUBP1P53384 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NUBP1P53384 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.94■□□□□ 0.3
NUBP1P53384 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC16.94■□□□□ 0.3
NUBP1P53384 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.94■□□□□ 0.3
NUBP1P53384 AC012181.2-201ENST00000570210 699 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 AC103810.3-201ENST00000583567 96 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 AC007423.1-201ENST00000605009 627 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 AC022919.1-201ENST00000624979 626 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.94■□□□□ 0.3
NUBP1P53384 AL023806.1-201ENST00000603994 1649 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.94■□□□□ 0.3
NUBP1P53384 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NUBP1P53384 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 CCNT2P1-201ENST00000423082 1315 ntBASIC16.94■□□□□ 0.3
NUBP1P53384 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.94■□□□□ 0.3
NUBP1P53384 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUBP1P53384 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NUBP1P53384 AL353732.1-201ENST00000569618 1459 ntBASIC16.93■□□□□ 0.3
NUBP1P53384 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 AL445523.1-201ENST00000451184 1362 ntBASIC16.93■□□□□ 0.3
NUBP1P53384 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.93■□□□□ 0.3
NUBP1P53384 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NUBP1P53384 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NUBP1P53384 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NUBP1P53384 ELK2AP-201ENST00000392510 1007 ntBASIC16.93■□□□□ 0.3
NUBP1P53384 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NUBP1P53384 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.93■□□□□ 0.3
NUBP1P53384 AC142381.1-201ENST00000426099 345 ntBASIC16.93■□□□□ 0.3
NUBP1P53384 AL353705.2-201ENST00000428243 662 ntBASIC16.93■□□□□ 0.3
NUBP1P53384 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 AC135586.1-201ENST00000539323 574 ntBASIC16.93■□□□□ 0.3
NUBP1P53384 AC092552.1-201ENST00000547243 906 ntBASIC16.93■□□□□ 0.3
NUBP1P53384 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.93■□□□□ 0.3
NUBP1P53384 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.93■□□□□ 0.3
NUBP1P53384 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC16.93■□□□□ 0.3
NUBP1P53384 AL157392.4-201ENST00000609756 345 ntBASIC16.93■□□□□ 0.3
NUBP1P53384 AC004840.1-201ENST00000636359 365 ntBASIC16.93■□□□□ 0.3
NUBP1P53384 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC16.93■□□□□ 0.3
NUBP1P53384 RFC1-217ENST00000639695 867 ntTSL 5 BASIC16.93■□□□□ 0.3
NUBP1P53384 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NUBP1P53384 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUBP1P53384 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NUBP1P53384 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NUBP1P53384 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NUBP1P53384 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NUBP1P53384 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
NUBP1P53384 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.92■□□□□ 0.3
NUBP1P53384 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUBP1P53384 MEP1AP4-201ENST00000423244 1087 ntBASIC16.92■□□□□ 0.3
NUBP1P53384 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC16.92■□□□□ 0.3
NUBP1P53384 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.92■□□□□ 0.3
NUBP1P53384 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.92■□□□□ 0.3
NUBP1P53384 AC119751.2-201ENST00000504529 210 ntBASIC16.92■□□□□ 0.3
NUBP1P53384 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC16.92■□□□□ 0.3
NUBP1P53384 AC026407.1-201ENST00000518369 204 ntBASIC16.92■□□□□ 0.3
NUBP1P53384 AP001981.1-201ENST00000531132 738 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms