Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
BRCA2P51587 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.82■□□□□ 0.6
BRCA2P51587 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
BRCA2P51587 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.82■□□□□ 0.6
BRCA2P51587 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.82■□□□□ 0.6
BRCA2P51587 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.82■□□□□ 0.6
BRCA2P51587 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.82■□□□□ 0.6
BRCA2P51587 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
BRCA2P51587 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCA2P51587 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.82■□□□□ 0.6
BRCA2P51587 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 AC234783.1-201ENST00000441761 496 ntBASIC18.81■□□□□ 0.6
BRCA2P51587 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.81■□□□□ 0.6
BRCA2P51587 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.81■□□□□ 0.6
BRCA2P51587 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.81■□□□□ 0.6
BRCA2P51587 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 RHOQP1-201ENST00000555758 579 ntBASIC18.81■□□□□ 0.6
BRCA2P51587 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BRCA2P51587 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.81■□□□□ 0.6
BRCA2P51587 AC099548.2-209ENST00000480264 625 ntBASIC18.81■□□□□ 0.6
BRCA2P51587 AL031055.1-201ENST00000606362 631 ntBASIC18.81■□□□□ 0.6
BRCA2P51587 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 AL355312.1-201ENST00000407115 2176 ntBASIC18.81■□□□□ 0.6
BRCA2P51587 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.81■□□□□ 0.6
BRCA2P51587 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRCA2P51587 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
BRCA2P51587 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.8■□□□□ 0.6
BRCA2P51587 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCA2P51587 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BRCA2P51587 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCA2P51587 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRCA2P51587 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.8■□□□□ 0.6
BRCA2P51587 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.8■□□□□ 0.6
BRCA2P51587 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
BRCA2P51587 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.8■□□□□ 0.6
BRCA2P51587 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRCA2P51587 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCA2P51587 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCA2P51587 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.8■□□□□ 0.6
BRCA2P51587 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
BRCA2P51587 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRCA2P51587 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
BRCA2P51587 CROCCP4-201ENST00000457096 498 ntBASIC18.8■□□□□ 0.6
BRCA2P51587 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BRCA2P51587 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.79■□□□□ 0.6
BRCA2P51587 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BRCA2P51587 ACTBP11-201ENST00000436287 1126 ntBASIC18.79■□□□□ 0.6
BRCA2P51587 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.79■□□□□ 0.6
BRCA2P51587 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.79■□□□□ 0.6
BRCA2P51587 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
BRCA2P51587 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.79■□□□□ 0.6
BRCA2P51587 TMEM261P1-201ENST00000604899 340 ntBASIC18.79■□□□□ 0.6
BRCA2P51587 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.79■□□□□ 0.6
BRCA2P51587 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms