Protein–RNA interactions for Protein: P00846

MT-ATP6, ATP synthase subunit a, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ATP6P00846 LAGE3P1-201ENST00000425356 484 ntBASIC15.33■□□□□ 0.04
MT-ATP6P00846 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 AF228730.7-201ENST00000641842 219 ntBASIC15.33■□□□□ 0.04
MT-ATP6P00846 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.33■□□□□ 0.04
MT-ATP6P00846 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MT-ATP6P00846 AC084018.2-201ENST00000613093 2607 ntBASIC15.32■□□□□ 0.04
MT-ATP6P00846 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 AC006557.2-201ENST00000592985 1240 ntBASIC15.32■□□□□ 0.04
MT-ATP6P00846 IFNL4P1-201ENST00000607083 540 ntBASIC15.32■□□□□ 0.04
MT-ATP6P00846 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ATP6P00846 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.32■□□□□ 0.04
MT-ATP6P00846 LINC00895-201ENST00000629028 1637 ntBASIC15.32■□□□□ 0.04
MT-ATP6P00846 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 FLJ38576-201ENST00000623820 2459 ntBASIC15.31■□□□□ 0.04
MT-ATP6P00846 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 KRT18P56-201ENST00000507275 550 ntBASIC15.31■□□□□ 0.04
MT-ATP6P00846 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ATP6P00846 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.31■□□□□ 0.04
MT-ATP6P00846 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
MT-ATP6P00846 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms