Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ACTN4O43707 AL391256.1-201ENST00000443260 1855 ntBASIC19.13■□□□□ 0.65
ACTN4O43707 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
ACTN4O43707 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
ACTN4O43707 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.13■□□□□ 0.65
ACTN4O43707 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.13■□□□□ 0.65
ACTN4O43707 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
ACTN4O43707 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ACTN4O43707 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.13■□□□□ 0.65
ACTN4O43707 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.13■□□□□ 0.65
ACTN4O43707 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ACTN4O43707 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ACTN4O43707 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
ACTN4O43707 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.12■□□□□ 0.65
ACTN4O43707 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ACTN4O43707 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ACTN4O43707 RBM17P3-201ENST00000417687 1192 ntBASIC19.12■□□□□ 0.65
ACTN4O43707 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ACTN4O43707 AL022326.1-202ENST00000641533 845 ntBASIC19.12■□□□□ 0.65
ACTN4O43707 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ACTN4O43707 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACTN4O43707 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.12■□□□□ 0.65
ACTN4O43707 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.12■□□□□ 0.65
ACTN4O43707 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
ACTN4O43707 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.11■□□□□ 0.65
ACTN4O43707 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.11■□□□□ 0.65
ACTN4O43707 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.11■□□□□ 0.65
ACTN4O43707 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.11■□□□□ 0.65
ACTN4O43707 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 TERC-201ENST00000602385 541 ntBASIC19.11■□□□□ 0.65
ACTN4O43707 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 AL139288.1-201ENST00000623748 933 ntBASIC19.11■□□□□ 0.65
ACTN4O43707 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ACTN4O43707 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ACTN4O43707 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.11■□□□□ 0.65
ACTN4O43707 LINC00895-201ENST00000629028 1637 ntBASIC19.11■□□□□ 0.65
ACTN4O43707 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.1■□□□□ 0.65
ACTN4O43707 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
ACTN4O43707 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.1■□□□□ 0.65
ACTN4O43707 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 AC018695.7-201ENST00000624587 2492 ntBASIC19.1■□□□□ 0.65
ACTN4O43707 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ACTN4O43707 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
ACTN4O43707 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms