Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX39AO00148 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX39AO00148 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
DDX39AO00148 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX39AO00148 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX39AO00148 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
DDX39AO00148 DNAJB3-201ENST00000446806 729 ntBASIC19.16■□□□□ 0.66
DDX39AO00148 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX39AO00148 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX39AO00148 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX39AO00148 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX39AO00148 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.16■□□□□ 0.66
DDX39AO00148 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX39AO00148 MIR3687-2-201ENST00000577708 61 ntBASIC19.16■□□□□ 0.66
DDX39AO00148 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX39AO00148 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX39AO00148 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX39AO00148 MTDHP5-201ENST00000598980 586 ntBASIC19.16■□□□□ 0.66
DDX39AO00148 AL078644.1-201ENST00000609881 752 ntBASIC19.16■□□□□ 0.66
DDX39AO00148 MIR3687-1-201ENST00000614492 61 ntBASIC19.16■□□□□ 0.66
DDX39AO00148 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX39AO00148 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
DDX39AO00148 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX39AO00148 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
DDX39AO00148 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
DDX39AO00148 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DDX39AO00148 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX39AO00148 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX39AO00148 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DDX39AO00148 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
DDX39AO00148 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX39AO00148 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX39AO00148 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
DDX39AO00148 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX39AO00148 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.15■□□□□ 0.66
DDX39AO00148 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
DDX39AO00148 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
DDX39AO00148 PDPK2P-202ENST00000562415 1191 ntBASIC19.15■□□□□ 0.66
DDX39AO00148 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.15■□□□□ 0.66
DDX39AO00148 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX39AO00148 AC007064.4-201ENST00000637740 555 ntBASIC19.15■□□□□ 0.66
DDX39AO00148 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DDX39AO00148 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX39AO00148 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX39AO00148 FRMD8P1-201ENST00000440433 1524 ntBASIC19.15■□□□□ 0.66
DDX39AO00148 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.15■□□□□ 0.66
DDX39AO00148 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DDX39AO00148 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.14■□□□□ 0.66
DDX39AO00148 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
DDX39AO00148 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
DDX39AO00148 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX39AO00148 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX39AO00148 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX39AO00148 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX39AO00148 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
DDX39AO00148 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX39AO00148 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DDX39AO00148 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX39AO00148 MCCD1P2-201ENST00000423228 335 ntBASIC19.14■□□□□ 0.65
DDX39AO00148 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DDX39AO00148 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX39AO00148 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.14■□□□□ 0.65
DDX39AO00148 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.14■□□□□ 0.65
DDX39AO00148 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.14■□□□□ 0.65
DDX39AO00148 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX39AO00148 AC129492.6-201ENST00000611383 1305 ntBASIC19.14■□□□□ 0.65
DDX39AO00148 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX39AO00148 AL023806.1-201ENST00000603994 1649 ntBASIC19.14■□□□□ 0.65
DDX39AO00148 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX39AO00148 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.14■□□□□ 0.65
DDX39AO00148 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DDX39AO00148 AC012313.1-201ENST00000593393 3059 ntBASIC19.14■□□□□ 0.65
DDX39AO00148 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DDX39AO00148 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.13■□□□□ 0.65
DDX39AO00148 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms