Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 IL9RP2-201ENST00000423948 1312 ntBASIC15.34■□□□□ 0.05
USB1Q9BQ65 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.34■□□□□ 0.05
USB1Q9BQ65 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USB1Q9BQ65 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USB1Q9BQ65 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
USB1Q9BQ65 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
USB1Q9BQ65 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.33■□□□□ 0.05
USB1Q9BQ65 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
USB1Q9BQ65 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 REXO1L9P-201ENST00000604264 2108 ntBASIC15.33■□□□□ 0.04
USB1Q9BQ65 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.33■□□□□ 0.04
USB1Q9BQ65 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
USB1Q9BQ65 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 AC138028.4-201ENST00000564984 1845 ntBASIC15.32■□□□□ 0.04
USB1Q9BQ65 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 AL035696.2-201ENST00000407941 709 ntBASIC15.32■□□□□ 0.04
USB1Q9BQ65 RPS2P1-201ENST00000434010 821 ntBASIC15.32■□□□□ 0.04
USB1Q9BQ65 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 STK25P1-201ENST00000585406 838 ntBASIC15.32■□□□□ 0.04
USB1Q9BQ65 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 AC148477.8-201ENST00000624298 468 ntBASIC15.32■□□□□ 0.04
USB1Q9BQ65 AC092723.2-201ENST00000624955 793 ntBASIC15.32■□□□□ 0.04
USB1Q9BQ65 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 NCF1C-201ENST00000438382 1427 ntBASIC15.32■□□□□ 0.04
USB1Q9BQ65 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
USB1Q9BQ65 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USB1Q9BQ65 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
USB1Q9BQ65 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USB1Q9BQ65 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USB1Q9BQ65 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
USB1Q9BQ65 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USB1Q9BQ65 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USB1Q9BQ65 GNAS-203ENST00000306120 1878 ntBASIC15.31■□□□□ 0.04
USB1Q9BQ65 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
USB1Q9BQ65 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USB1Q9BQ65 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms