Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.84■□□□□ 0.45
SMOQ99835 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMOQ99835 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMOQ99835 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.83■□□□□ 0.45
SMOQ99835 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SMOQ99835 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SMOQ99835 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SMOQ99835 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.83■□□□□ 0.45
SMOQ99835 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SMOQ99835 AC026471.1-201ENST00000564629 3026 ntBASIC17.83■□□□□ 0.45
SMOQ99835 AL353732.1-201ENST00000569618 1459 ntBASIC17.83■□□□□ 0.45
SMOQ99835 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SMOQ99835 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMOQ99835 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMOQ99835 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SMOQ99835 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SMOQ99835 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMOQ99835 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SMOQ99835 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMOQ99835 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMOQ99835 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.83■□□□□ 0.44
SMOQ99835 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.83■□□□□ 0.44
SMOQ99835 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.83■□□□□ 0.44
SMOQ99835 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMOQ99835 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.83■□□□□ 0.44
SMOQ99835 MPDU1-223ENST00000582151 728 ntBASIC17.83■□□□□ 0.44
SMOQ99835 MIR4515-201ENST00000584082 81 ntBASIC17.83■□□□□ 0.44
SMOQ99835 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMOQ99835 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.83■□□□□ 0.44
SMOQ99835 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMOQ99835 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SMOQ99835 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SMOQ99835 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMOQ99835 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMOQ99835 AC092919.2-201ENST00000623631 1645 ntBASIC17.83■□□□□ 0.44
SMOQ99835 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMOQ99835 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.82■□□□□ 0.44
SMOQ99835 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 HMGA1P7-201ENST00000406908 502 ntBASIC17.82■□□□□ 0.44
SMOQ99835 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
SMOQ99835 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 DNAJB3-201ENST00000446806 729 ntBASIC17.82■□□□□ 0.44
SMOQ99835 ALG1L5P-201ENST00000482043 771 ntBASIC17.82■□□□□ 0.44
SMOQ99835 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.82■□□□□ 0.44
SMOQ99835 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.82■□□□□ 0.44
SMOQ99835 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.82■□□□□ 0.44
SMOQ99835 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SMOQ99835 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SMOQ99835 AC012313.1-201ENST00000593393 3059 ntBASIC17.82■□□□□ 0.44
SMOQ99835 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 HCG11-201ENST00000411553 5696 ntBASIC17.82■□□□□ 0.44
SMOQ99835 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMOQ99835 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.81■□□□□ 0.44
SMOQ99835 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.81■□□□□ 0.44
SMOQ99835 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SMOQ99835 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 AL121761.2-201ENST00000598007 1648 ntBASIC17.81■□□□□ 0.44
SMOQ99835 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.81■□□□□ 0.44
SMOQ99835 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.81■□□□□ 0.44
SMOQ99835 AC091167.2-201ENST00000579581 588 ntBASIC17.81■□□□□ 0.44
SMOQ99835 AC055717.3-201ENST00000622967 595 ntBASIC17.81■□□□□ 0.44
SMOQ99835 AL645728.2-201ENST00000641974 660 ntBASIC17.81■□□□□ 0.44
SMOQ99835 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMOQ99835 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 PCDHB17P-201ENST00000539533 2393 ntBASIC17.81■□□□□ 0.44
SMOQ99835 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMOQ99835 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMOQ99835 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms