Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.02■□□□□ -0
TMEM54Q969K7 TOP3BP1-201ENST00000420768 1380 ntBASIC15.02■□□□□ -0
TMEM54Q969K7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TMEM54Q969K7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.02■□□□□ -0
TMEM54Q969K7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM54Q969K7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM54Q969K7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM54Q969K7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.02■□□□□ -0
TMEM54Q969K7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.02■□□□□ -0
TMEM54Q969K7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM54Q969K7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TMEM54Q969K7 RNA5SP419-201ENST00000515908 135 ntBASIC15.02■□□□□ -0
TMEM54Q969K7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.02■□□□□ -0
TMEM54Q969K7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM54Q969K7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.02■□□□□ -0
TMEM54Q969K7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.02■□□□□ -0
TMEM54Q969K7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TMEM54Q969K7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.02■□□□□ -0
TMEM54Q969K7 AL049840.3-201ENST00000602669 611 ntBASIC15.02■□□□□ -0
TMEM54Q969K7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.02■□□□□ -0
TMEM54Q969K7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.02■□□□□ -0
TMEM54Q969K7 MIR7706-201ENST00000613747 67 ntBASIC15.02■□□□□ -0
TMEM54Q969K7 REXO1L3P-201ENST00000622202 1288 ntBASIC15.02■□□□□ -0
TMEM54Q969K7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.02■□□□□ -0
TMEM54Q969K7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.02□□□□□ -0.01
TMEM54Q969K7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TMEM54Q969K7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM54Q969K7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM54Q969K7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TMEM54Q969K7 AC078925.2-201ENST00000624013 1973 ntBASIC15.02□□□□□ -0.01
TMEM54Q969K7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 AGGF1P2-201ENST00000426656 2106 ntBASIC15.01□□□□□ -0.01
TMEM54Q969K7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 AL662844.1-201ENST00000546340 181 ntBASIC15.01□□□□□ -0.01
TMEM54Q969K7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 SLC25A6P4-201ENST00000586535 553 ntBASIC15.01□□□□□ -0.01
TMEM54Q969K7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TMEM54Q969K7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM54Q969K7 AC011676.5-201ENST00000624864 2660 ntBASIC15□□□□□ -0.01
TMEM54Q969K7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15□□□□□ -0.01
TMEM54Q969K7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15□□□□□ -0.01
TMEM54Q969K7 LINC00895-201ENST00000629028 1637 ntBASIC15□□□□□ -0.01
TMEM54Q969K7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15□□□□□ -0.01
TMEM54Q969K7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15□□□□□ -0.01
TMEM54Q969K7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15□□□□□ -0.01
TMEM54Q969K7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
TMEM54Q969K7 AC092910.1-201ENST00000482027 1129 ntBASIC15□□□□□ -0.01
TMEM54Q969K7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15□□□□□ -0.01
TMEM54Q969K7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15□□□□□ -0.01
TMEM54Q969K7 AP001005.1-201ENST00000571755 1248 ntBASIC15□□□□□ -0.01
TMEM54Q969K7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15□□□□□ -0.01
TMEM54Q969K7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TMEM54Q969K7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms