Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC83Q8IWF9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 AL591684.3-201ENST00000605187 298 ntBASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CCDC83Q8IWF9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 AC079776.2-201ENST00000641154 1609 ntBASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 SIGLEC16-201ENST00000599858 1437 ntBASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC83Q8IWF9 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 PCDH8P1-201ENST00000428983 2773 ntBASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 AL662844.4-201ENST00000606367 2838 ntBASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 LINC00982-205ENST00000420957 435 ntBASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 AP001269.4-201ENST00000609611 512 ntBASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC83Q8IWF9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 DUX4L17-201ENST00000557360 1267 ntBASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 AC073592.4-201ENST00000623827 446 ntBASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms