Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 DNAJB3-201ENST00000446806 729 ntBASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 AC112482.1-201ENST00000492080 688 ntBASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HERC4Q5GLZ8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 AC104109.2-201ENST00000602919 1418 ntBASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 HNRNPDP1-201ENST00000439535 754 ntBASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 IGHV3-22-201ENST00000520721 359 ntBASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HERC4Q5GLZ8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 PCDHA12-202ENST00000613593 2588 ntBASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 YBX2P1-201ENST00000394192 760 ntBASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HERC4Q5GLZ8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.08■□□□□ 0.65
HERC4Q5GLZ8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.08■□□□□ 0.64
HERC4Q5GLZ8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms