Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 TOP3BP1-201ENST00000420768 1380 ntBASIC16.1■□□□□ 0.17
TRA2BP62995 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRA2BP62995 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRA2BP62995 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
TRA2BP62995 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRA2BP62995 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.09■□□□□ 0.17
TRA2BP62995 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.09■□□□□ 0.17
TRA2BP62995 AC006504.4-201ENST00000592118 1568 ntBASIC16.09■□□□□ 0.17
TRA2BP62995 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TRA2BP62995 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
TRA2BP62995 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.09■□□□□ 0.17
TRA2BP62995 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.09■□□□□ 0.17
TRA2BP62995 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.09■□□□□ 0.17
TRA2BP62995 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.09■□□□□ 0.17
TRA2BP62995 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.09■□□□□ 0.17
TRA2BP62995 EMBP1-201ENST00000458200 901 ntBASIC16.09■□□□□ 0.17
TRA2BP62995 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.09■□□□□ 0.17
TRA2BP62995 RNPS1P1-201ENST00000507437 918 ntBASIC16.09■□□□□ 0.17
TRA2BP62995 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.09■□□□□ 0.17
TRA2BP62995 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.09■□□□□ 0.17
TRA2BP62995 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.09■□□□□ 0.17
TRA2BP62995 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.09■□□□□ 0.17
TRA2BP62995 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.09■□□□□ 0.17
TRA2BP62995 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 GGTLC5P-201ENST00000617623 998 ntBASIC16.09■□□□□ 0.17
TRA2BP62995 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRA2BP62995 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRA2BP62995 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.09■□□□□ 0.17
TRA2BP62995 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRA2BP62995 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.08■□□□□ 0.17
TRA2BP62995 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRA2BP62995 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.08■□□□□ 0.17
TRA2BP62995 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRA2BP62995 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.08■□□□□ 0.17
TRA2BP62995 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRA2BP62995 RPS2P28-201ENST00000314255 741 ntBASIC16.08■□□□□ 0.16
TRA2BP62995 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.08■□□□□ 0.16
TRA2BP62995 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.08■□□□□ 0.16
TRA2BP62995 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.08■□□□□ 0.16
TRA2BP62995 ELK2BP-201ENST00000415014 1224 ntBASIC16.08■□□□□ 0.16
TRA2BP62995 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.08■□□□□ 0.16
TRA2BP62995 FAAHP1-202ENST00000446499 1238 ntBASIC16.08■□□□□ 0.16
TRA2BP62995 FAM197Y8-203ENST00000450145 560 ntBASIC16.08■□□□□ 0.16
TRA2BP62995 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.08■□□□□ 0.16
TRA2BP62995 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRA2BP62995 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRA2BP62995 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.08■□□□□ 0.16
TRA2BP62995 PGM5P2-202ENST00000637225 1043 ntBASIC16.08■□□□□ 0.16
TRA2BP62995 AL139011.1-202ENST00000642063 584 ntBASIC16.08■□□□□ 0.16
TRA2BP62995 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRA2BP62995 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.08■□□□□ 0.16
TRA2BP62995 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
TRA2BP62995 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRA2BP62995 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRA2BP62995 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.08■□□□□ 0.16
TRA2BP62995 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRA2BP62995 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.08■□□□□ 0.16
TRA2BP62995 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.08■□□□□ 0.16
TRA2BP62995 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRA2BP62995 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRA2BP62995 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRA2BP62995 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.08■□□□□ 0.16
TRA2BP62995 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
TRA2BP62995 PI4KAP1-204ENST00000612579 1703 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms