Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.69□□□□□ -0.06
CCL1P22362 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 AL022326.1-202ENST00000641533 845 ntBASIC14.69□□□□□ -0.06
CCL1P22362 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL1P22362 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
CCL1P22362 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL1P22362 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCL1P22362 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
CCL1P22362 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL1P22362 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.68□□□□□ -0.06
CCL1P22362 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCL1P22362 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 AC018695.7-201ENST00000624587 2492 ntBASIC14.68□□□□□ -0.06
CCL1P22362 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CCL1P22362 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL1P22362 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CCL1P22362 AC006277.1-201ENST00000624348 1610 ntBASIC14.68□□□□□ -0.06
CCL1P22362 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.68□□□□□ -0.06
CCL1P22362 RBM17P3-201ENST00000417687 1192 ntBASIC14.68□□□□□ -0.06
CCL1P22362 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.68□□□□□ -0.06
CCL1P22362 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.68□□□□□ -0.06
CCL1P22362 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL1P22362 AL139288.1-201ENST00000623748 933 ntBASIC14.68□□□□□ -0.06
CCL1P22362 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL1P22362 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL1P22362 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCL1P22362 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 AC026691.1-201ENST00000602502 2017 ntBASIC14.68□□□□□ -0.06
CCL1P22362 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL1P22362 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCL1P22362 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CCL1P22362 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CCL1P22362 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CCL1P22362 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.67□□□□□ -0.06
CCL1P22362 AC132008.2-207ENST00000454517 770 ntBASIC14.67□□□□□ -0.06
CCL1P22362 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL1P22362 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL1P22362 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.67□□□□□ -0.06
CCL1P22362 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CCL1P22362 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
CCL1P22362 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL1P22362 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.67□□□□□ -0.06
CCL1P22362 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.67□□□□□ -0.06
CCL1P22362 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL1P22362 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL1P22362 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.67□□□□□ -0.06
CCL1P22362 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL1P22362 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL1P22362 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL1P22362 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCL1P22362 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms