Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC116407.3-201ENST00000623905 1129 ntBASIC17.93■□□□□ 0.46
APOEP02649 AC005593.1-201ENST00000624894 515 ntBASIC17.93■□□□□ 0.46
APOEP02649 PGM5P2-202ENST00000637225 1043 ntBASIC17.93■□□□□ 0.46
APOEP02649 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.93■□□□□ 0.46
APOEP02649 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.93■□□□□ 0.46
APOEP02649 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 AL121761.2-201ENST00000598007 1648 ntBASIC17.93■□□□□ 0.46
APOEP02649 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
APOEP02649 AP002414.3-201ENST00000589352 1468 ntBASIC17.93■□□□□ 0.46
APOEP02649 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.93■□□□□ 0.46
APOEP02649 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.93■□□□□ 0.46
APOEP02649 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.93■□□□□ 0.46
APOEP02649 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOEP02649 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
APOEP02649 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.92■□□□□ 0.46
APOEP02649 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
APOEP02649 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
APOEP02649 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.92■□□□□ 0.46
APOEP02649 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.92■□□□□ 0.46
APOEP02649 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
APOEP02649 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.92■□□□□ 0.46
APOEP02649 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.92■□□□□ 0.46
APOEP02649 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
APOEP02649 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.92■□□□□ 0.46
APOEP02649 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.92■□□□□ 0.46
APOEP02649 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.92■□□□□ 0.46
APOEP02649 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.92■□□□□ 0.46
APOEP02649 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 AC120114.3-201ENST00000611923 658 ntBASIC17.92■□□□□ 0.46
APOEP02649 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.92■□□□□ 0.46
APOEP02649 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.92■□□□□ 0.46
APOEP02649 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.92■□□□□ 0.46
APOEP02649 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.92■□□□□ 0.46
APOEP02649 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.92■□□□□ 0.46
APOEP02649 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APOEP02649 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
APOEP02649 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.91■□□□□ 0.46
APOEP02649 AC006504.4-201ENST00000592118 1568 ntBASIC17.91■□□□□ 0.46
APOEP02649 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
APOEP02649 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.91■□□□□ 0.46
APOEP02649 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
APOEP02649 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 GPR89P-201ENST00000407924 1495 ntBASIC17.91■□□□□ 0.46
APOEP02649 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.91■□□□□ 0.46
APOEP02649 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.91■□□□□ 0.46
APOEP02649 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.91■□□□□ 0.46
APOEP02649 AC098831.1-202ENST00000438821 336 ntBASIC17.91■□□□□ 0.46
APOEP02649 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 BX640515.1-201ENST00000617215 977 ntBASIC17.91■□□□□ 0.46
APOEP02649 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.91■□□□□ 0.46
APOEP02649 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.91■□□□□ 0.46
APOEP02649 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
APOEP02649 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
APOEP02649 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
APOEP02649 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
APOEP02649 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
APOEP02649 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
APOEP02649 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
APOEP02649 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOEP02649 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOEP02649 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
APOEP02649 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOEP02649 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOEP02649 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
APOEP02649 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.9■□□□□ 0.46
APOEP02649 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOEP02649 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOEP02649 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.9■□□□□ 0.46
APOEP02649 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOEP02649 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOEP02649 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOEP02649 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms