Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSPG5O95196 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.33■□□□□ 0.53
CSPG5O95196 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CSPG5O95196 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSPG5O95196 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.33■□□□□ 0.53
CSPG5O95196 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.33■□□□□ 0.53
CSPG5O95196 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.33■□□□□ 0.53
CSPG5O95196 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSPG5O95196 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSPG5O95196 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CSPG5O95196 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.33■□□□□ 0.53
CSPG5O95196 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSPG5O95196 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CSPG5O95196 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CSPG5O95196 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSPG5O95196 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CSPG5O95196 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CSPG5O95196 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.33■□□□□ 0.52
CSPG5O95196 MIR943-201ENST00000401286 94 ntBASIC18.33■□□□□ 0.52
CSPG5O95196 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.33■□□□□ 0.52
CSPG5O95196 KRT18P32-201ENST00000424695 1287 ntBASIC18.33■□□□□ 0.52
CSPG5O95196 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.33■□□□□ 0.52
CSPG5O95196 ADH5P3-201ENST00000433842 1137 ntBASIC18.33■□□□□ 0.52
CSPG5O95196 DDX43P3-201ENST00000441064 443 ntBASIC18.33■□□□□ 0.52
CSPG5O95196 AL592309.1-201ENST00000443127 649 ntBASIC18.33■□□□□ 0.52
CSPG5O95196 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.33■□□□□ 0.52
CSPG5O95196 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.33■□□□□ 0.52
CSPG5O95196 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.33■□□□□ 0.52
CSPG5O95196 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.33■□□□□ 0.52
CSPG5O95196 AC099522.2-201ENST00000607001 744 ntBASIC18.33■□□□□ 0.52
CSPG5O95196 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.33■□□□□ 0.52
CSPG5O95196 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.33■□□□□ 0.52
CSPG5O95196 AL121761.2-201ENST00000598007 1648 ntBASIC18.33■□□□□ 0.52
CSPG5O95196 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CSPG5O95196 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.33■□□□□ 0.52
CSPG5O95196 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSPG5O95196 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.32■□□□□ 0.52
CSPG5O95196 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 AL135999.2-201ENST00000622438 1686 ntBASIC18.32■□□□□ 0.52
CSPG5O95196 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CSPG5O95196 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 AC015922.1-201ENST00000421102 1152 ntBASIC18.32■□□□□ 0.52
CSPG5O95196 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CSPG5O95196 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.32■□□□□ 0.52
CSPG5O95196 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.32■□□□□ 0.52
CSPG5O95196 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.32■□□□□ 0.52
CSPG5O95196 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.32■□□□□ 0.52
CSPG5O95196 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.32■□□□□ 0.52
CSPG5O95196 IGHV3-42-201ENST00000520410 361 ntBASIC18.32■□□□□ 0.52
CSPG5O95196 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.32■□□□□ 0.52
CSPG5O95196 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.32■□□□□ 0.52
CSPG5O95196 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
CSPG5O95196 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 AC009093.7-201ENST00000623853 1223 ntBASIC18.32■□□□□ 0.52
CSPG5O95196 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.32■□□□□ 0.52
CSPG5O95196 AF228730.6-201ENST00000641497 218 ntBASIC18.32■□□□□ 0.52
CSPG5O95196 AC084121.3-201ENST00000641716 218 ntBASIC18.32■□□□□ 0.52
CSPG5O95196 AC105233.6-201ENST00000642093 218 ntBASIC18.32■□□□□ 0.52
CSPG5O95196 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSPG5O95196 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSPG5O95196 AC068880.1-201ENST00000507289 2297 ntBASIC18.32■□□□□ 0.52
CSPG5O95196 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.31■□□□□ 0.52
CSPG5O95196 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.31■□□□□ 0.52
CSPG5O95196 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.31■□□□□ 0.52
CSPG5O95196 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.31■□□□□ 0.52
CSPG5O95196 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSPG5O95196 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CSPG5O95196 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.31■□□□□ 0.52
CSPG5O95196 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms