Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST1O76090 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST1O76090 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST1O76090 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
BEST1O76090 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST1O76090 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST1O76090 PCDHB17P-201ENST00000539533 2393 ntBASIC17.86■□□□□ 0.45
BEST1O76090 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST1O76090 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.86■□□□□ 0.45
BEST1O76090 MCCD1P2-201ENST00000423228 335 ntBASIC17.86■□□□□ 0.45
BEST1O76090 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
BEST1O76090 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.86■□□□□ 0.45
BEST1O76090 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST1O76090 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST1O76090 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 AC010327.4-202ENST00000591484 748 ntBASIC17.86■□□□□ 0.45
BEST1O76090 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.86■□□□□ 0.45
BEST1O76090 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
BEST1O76090 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST1O76090 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
BEST1O76090 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST1O76090 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST1O76090 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
BEST1O76090 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
BEST1O76090 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
BEST1O76090 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST1O76090 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BEST1O76090 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BEST1O76090 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.85■□□□□ 0.45
BEST1O76090 AC112482.1-201ENST00000492080 688 ntBASIC17.85■□□□□ 0.45
BEST1O76090 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.85■□□□□ 0.45
BEST1O76090 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.85■□□□□ 0.45
BEST1O76090 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 KRT8P49-201ENST00000604166 1432 ntBASIC17.85■□□□□ 0.45
BEST1O76090 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.85■□□□□ 0.45
BEST1O76090 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.85■□□□□ 0.45
BEST1O76090 AC092919.2-201ENST00000623631 1645 ntBASIC17.85■□□□□ 0.45
BEST1O76090 AC007064.4-201ENST00000637740 555 ntBASIC17.85■□□□□ 0.45
BEST1O76090 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST1O76090 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BEST1O76090 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
BEST1O76090 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST1O76090 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
BEST1O76090 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BEST1O76090 KRT18P13-201ENST00000400056 1290 ntBASIC17.84■□□□□ 0.45
BEST1O76090 RPSAP43-201ENST00000402237 625 ntBASIC17.84■□□□□ 0.45
BEST1O76090 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST1O76090 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
BEST1O76090 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.84■□□□□ 0.45
BEST1O76090 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST1O76090 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST1O76090 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.84■□□□□ 0.45
BEST1O76090 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms