Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.74■□□□□ 0.43
SRRM3A6NNA2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 AC239800.4-201ENST00000603712 296 ntBASIC17.74■□□□□ 0.43
SRRM3A6NNA2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SRRM3A6NNA2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 LINC02012-201ENST00000608206 1725 ntBASIC17.73■□□□□ 0.43
SRRM3A6NNA2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 AC092850.2-201ENST00000623821 2697 ntBASIC17.73■□□□□ 0.43
SRRM3A6NNA2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 IGHV3-47-201ENST00000425060 335 ntBASIC17.73■□□□□ 0.43
SRRM3A6NNA2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 AC139887.3-201ENST00000568585 713 ntBASIC17.73■□□□□ 0.43
SRRM3A6NNA2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 IGHV3-41-201ENST00000613121 348 ntBASIC17.73■□□□□ 0.43
SRRM3A6NNA2 AC116407.2-201ENST00000613639 860 ntBASIC17.73■□□□□ 0.43
SRRM3A6NNA2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 AC132938.6-201ENST00000623828 1655 ntBASIC17.73■□□□□ 0.43
SRRM3A6NNA2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SRRM3A6NNA2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 AL391807.1-203ENST00000604392 2365 ntBASIC17.72■□□□□ 0.43
SRRM3A6NNA2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 AL024508.2-201ENST00000607749 1894 ntBASIC17.72■□□□□ 0.43
SRRM3A6NNA2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 GPX1P2-201ENST00000429271 606 ntBASIC17.72■□□□□ 0.43
SRRM3A6NNA2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 AC046185.3-201ENST00000623228 1824 ntBASIC17.72■□□□□ 0.43
SRRM3A6NNA2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.72■□□□□ 0.43
SRRM3A6NNA2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRRM3A6NNA2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.71■□□□□ 0.43
SRRM3A6NNA2 AL365203.3-201ENST00000609742 2057 ntBASIC17.71■□□□□ 0.43
SRRM3A6NNA2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRRM3A6NNA2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.71■□□□□ 0.43
SRRM3A6NNA2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRRM3A6NNA2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms