Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 AC211486.1-202ENST00000416371 468 ntBASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 HTR5BP-201ENST00000430851 1154 ntBASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 AC004967.1-201ENST00000453589 447 ntBASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 AC211476.1-201ENST00000503899 468 ntBASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 AC107918.2-201ENST00000530817 355 ntBASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 AL078644.1-201ENST00000609881 752 ntBASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 AC134684.3-201ENST00000641758 218 ntBASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CPNE7Q9UBL6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 TNRC18P3-201ENST00000441896 2691 ntBASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 MKNK2P1-201ENST00000437526 628 ntBASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE7Q9UBL6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 CROCCP2-202ENST00000412962 2773 ntBASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 RPS8P6-201ENST00000426177 609 ntBASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 YBX1P5-201ENST00000509441 847 ntBASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 MIR4469-201ENST00000583919 79 ntBASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 REXO1L3P-201ENST00000622202 1288 ntBASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 AC079781.4-201ENST00000641908 219 ntBASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE7Q9UBL6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms