Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 IGHV3-52-201ENST00000519770 353 ntBASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 AD001527.2-201ENST00000622994 785 ntBASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 AC004817.3-201ENST00000602957 2129 ntBASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 HLA-J-201ENST00000462773 1622 ntBASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 AC079776.2-201ENST00000641154 1609 ntBASIC14.41□□□□□ -0.1
PCGF1Q9BSM1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 AL162727.3-201ENST00000635661 2787 ntBASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 KLF4P1-201ENST00000412782 1185 ntBASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 AP000347.1-202ENST00000435868 847 ntBASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 HNRNPDP1-201ENST00000439535 754 ntBASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 AL049840.3-201ENST00000602669 611 ntBASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 IL9RP2-201ENST00000423948 1312 ntBASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.4□□□□□ -0.1
PCGF1Q9BSM1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 AL138688.1-201ENST00000624851 1594 ntBASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCGF1Q9BSM1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms