Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 FDX1P1-201ENST00000449115 551 ntBASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 AC005593.1-201ENST00000624894 515 ntBASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC148Q8NFR7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 AC026396.1-201ENST00000419388 421 ntBASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 TERC-201ENST00000602385 541 ntBASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 AF228730.7-201ENST00000641842 219 ntBASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 FRMD8P1-201ENST00000440433 1524 ntBASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC148Q8NFR7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 AC092910.1-201ENST00000482027 1129 ntBASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC148Q8NFR7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 PI4KAP1-204ENST00000612579 1703 ntBASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms