Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
PAF1Q8N7H5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 AC079776.2-201ENST00000641154 1609 ntBASIC17.62■□□□□ 0.41
PAF1Q8N7H5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 AC093909.1-201ENST00000504731 1122 ntBASIC17.62■□□□□ 0.41
PAF1Q8N7H5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 SART3-203ENST00000546611 1184 ntBASIC17.62■□□□□ 0.41
PAF1Q8N7H5 AL160237.2-201ENST00000556165 472 ntBASIC17.62■□□□□ 0.41
PAF1Q8N7H5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 STK25P1-201ENST00000585406 838 ntBASIC17.62■□□□□ 0.41
PAF1Q8N7H5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 AL022326.1-202ENST00000641533 845 ntBASIC17.62■□□□□ 0.41
PAF1Q8N7H5 AC046185.3-201ENST00000623228 1824 ntBASIC17.62■□□□□ 0.41
PAF1Q8N7H5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 NORAD-201ENST00000565493 5339 ntBASIC17.62■□□□□ 0.41
PAF1Q8N7H5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PAF1Q8N7H5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 SPDYE21P-201ENST00000413323 827 ntBASIC17.61■□□□□ 0.41
PAF1Q8N7H5 AC005104.2-201ENST00000427818 678 ntBASIC17.61■□□□□ 0.41
PAF1Q8N7H5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 MTDHP4-201ENST00000600287 670 ntBASIC17.61■□□□□ 0.41
PAF1Q8N7H5 AL139327.4-201ENST00000612362 153 ntBASIC17.61■□□□□ 0.41
PAF1Q8N7H5 TP73-AS1-207ENST00000624167 988 ntBASIC17.61■□□□□ 0.41
PAF1Q8N7H5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 AC009336.1-201ENST00000608941 1553 ntBASIC17.61■□□□□ 0.41
PAF1Q8N7H5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.61■□□□□ 0.41
PAF1Q8N7H5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 RPS2P28-201ENST00000314255 741 ntBASIC17.6■□□□□ 0.41
PAF1Q8N7H5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 KRT18P67-201ENST00000432816 1264 ntBASIC17.6■□□□□ 0.41
PAF1Q8N7H5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 RNPS1P1-201ENST00000507437 918 ntBASIC17.6■□□□□ 0.41
PAF1Q8N7H5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms