Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRK2Q5S007 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRRK2Q5S007 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRRK2Q5S007 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRK2Q5S007 MEP1AP4-201ENST00000423244 1087 ntBASIC14.64□□□□□ -0.07
LRRK2Q5S007 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 AL031055.1-201ENST00000606362 631 ntBASIC14.64□□□□□ -0.07
LRRK2Q5S007 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.64□□□□□ -0.07
LRRK2Q5S007 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRK2Q5S007 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRK2Q5S007 AL353732.1-201ENST00000569618 1459 ntBASIC14.64□□□□□ -0.07
LRRK2Q5S007 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 FAM220BP-201ENST00000377689 816 ntBASIC14.64□□□□□ -0.07
LRRK2Q5S007 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 DOC2GP-202ENST00000514950 1163 ntBASIC14.64□□□□□ -0.07
LRRK2Q5S007 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRK2Q5S007 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRK2Q5S007 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRK2Q5S007 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRK2Q5S007 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRK2Q5S007 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRK2Q5S007 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 AL020996.1-203ENST00000536896 2307 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 AC006538.1-201ENST00000567905 1585 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 KRT8P13-201ENST00000463294 1010 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 AC010319.3-201ENST00000597028 470 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 AC015967.2-201ENST00000624092 234 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 AC006435.4-201ENST00000625037 234 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 AL356737.1-201ENST00000634391 234 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 GPAA1P2-201ENST00000417923 928 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 CROCCP4-201ENST00000457096 498 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 AC073389.1-201ENST00000595595 795 ntBASIC14.63□□□□□ -0.07
LRRK2Q5S007 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRRK2Q5S007 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRRK2Q5S007 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 AC005332.7-201ENST00000614046 2005 ntBASIC14.62□□□□□ -0.07
LRRK2Q5S007 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRRK2Q5S007 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRRK2Q5S007 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms