Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL16A1Q07092 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC22.66■■□□□ 1.22
COL16A1Q07092 STARD13-205ENST00000439831 945 ntTSL 2 BASIC22.66■■□□□ 1.22
COL16A1Q07092 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL16A1Q07092 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
COL16A1Q07092 DERL2-202ENST00000570848 657 ntTSL 5 BASIC22.66■■□□□ 1.22
COL16A1Q07092 MIR3615-201ENST00000581999 87 ntBASIC22.66■■□□□ 1.22
COL16A1Q07092 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC22.66■■□□□ 1.22
COL16A1Q07092 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
COL16A1Q07092 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL16A1Q07092 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
COL16A1Q07092 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC22.65■■□□□ 1.22
COL16A1Q07092 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
COL16A1Q07092 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL16A1Q07092 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL16A1Q07092 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
COL16A1Q07092 NSL1-201ENST00000366976 722 ntTSL 2 BASIC22.65■■□□□ 1.22
COL16A1Q07092 AC005229.1-201ENST00000392885 409 ntBASIC22.65■■□□□ 1.22
COL16A1Q07092 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
COL16A1Q07092 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC22.65■■□□□ 1.22
COL16A1Q07092 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC22.65■■□□□ 1.22
COL16A1Q07092 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC22.65■■□□□ 1.22
COL16A1Q07092 CYP2A7P1-201ENST00000595391 815 ntBASIC22.65■■□□□ 1.22
COL16A1Q07092 MIR8072-201ENST00000614241 80 ntBASIC22.65■■□□□ 1.22
COL16A1Q07092 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL16A1Q07092 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL16A1Q07092 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC22.65■■□□□ 1.22
COL16A1Q07092 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
COL16A1Q07092 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL16A1Q07092 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL16A1Q07092 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL16A1Q07092 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL16A1Q07092 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL16A1Q07092 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
COL16A1Q07092 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC22.64■■□□□ 1.22
COL16A1Q07092 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC22.64■■□□□ 1.22
COL16A1Q07092 C2orf69P2-201ENST00000562032 1123 ntBASIC22.64■■□□□ 1.22
COL16A1Q07092 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL16A1Q07092 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC22.64■■□□□ 1.22
COL16A1Q07092 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
COL16A1Q07092 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.64■■□□□ 1.22
COL16A1Q07092 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL16A1Q07092 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL16A1Q07092 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC22.64■■□□□ 1.22
COL16A1Q07092 AC073439.1-201ENST00000624121 1774 ntBASIC22.64■■□□□ 1.21
COL16A1Q07092 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL16A1Q07092 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL16A1Q07092 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
COL16A1Q07092 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.64■■□□□ 1.21
COL16A1Q07092 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL16A1Q07092 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC22.64■■□□□ 1.21
COL16A1Q07092 MEP1AP4-201ENST00000423244 1087 ntBASIC22.64■■□□□ 1.21
COL16A1Q07092 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL16A1Q07092 CSF2RBP1-201ENST00000447905 391 ntBASIC22.64■■□□□ 1.21
COL16A1Q07092 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC22.64■■□□□ 1.21
COL16A1Q07092 SERBP1P3-201ENST00000459980 809 ntBASIC22.64■■□□□ 1.21
COL16A1Q07092 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL16A1Q07092 AC092337.1-201ENST00000568699 1129 ntBASIC22.64■■□□□ 1.21
COL16A1Q07092 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC22.64■■□□□ 1.21
COL16A1Q07092 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC22.64■■□□□ 1.21
COL16A1Q07092 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
COL16A1Q07092 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC22.63■■□□□ 1.21
COL16A1Q07092 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL16A1Q07092 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL16A1Q07092 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL16A1Q07092 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC22.63■■□□□ 1.21
COL16A1Q07092 GOLGA2P9-201ENST00000596977 1937 ntBASIC22.63■■□□□ 1.21
COL16A1Q07092 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL16A1Q07092 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL16A1Q07092 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL16A1Q07092 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.63■■□□□ 1.21
COL16A1Q07092 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL16A1Q07092 MIR663B-201ENST00000408361 115 ntBASIC22.63■■□□□ 1.21
COL16A1Q07092 GPAA1P2-201ENST00000417923 928 ntBASIC22.63■■□□□ 1.21
COL16A1Q07092 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC22.63■■□□□ 1.21
COL16A1Q07092 MAX-210ENST00000555419 765 ntTSL 5 BASIC22.63■■□□□ 1.21
COL16A1Q07092 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC22.63■■□□□ 1.21
COL16A1Q07092 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC22.63■■□□□ 1.21
COL16A1Q07092 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
COL16A1Q07092 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL16A1Q07092 SLC9A3P2-201ENST00000447821 2021 ntBASIC22.63■■□□□ 1.21
COL16A1Q07092 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL16A1Q07092 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC22.63■■□□□ 1.21
COL16A1Q07092 KRT18P55-202ENST00000578578 1546 ntBASIC22.63■■□□□ 1.21
COL16A1Q07092 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
COL16A1Q07092 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL16A1Q07092 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL16A1Q07092 AC135776.1-201ENST00000319817 2481 ntBASIC22.62■■□□□ 1.21
COL16A1Q07092 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL16A1Q07092 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
COL16A1Q07092 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC22.62■■□□□ 1.21
COL16A1Q07092 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC22.62■■□□□ 1.21
COL16A1Q07092 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC22.62■■□□□ 1.21
COL16A1Q07092 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC22.62■■□□□ 1.21
COL16A1Q07092 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC22.62■■□□□ 1.21
COL16A1Q07092 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC22.62■■□□□ 1.21
COL16A1Q07092 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL16A1Q07092 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL16A1Q07092 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC22.62■■□□□ 1.21
COL16A1Q07092 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms