Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CMC4P56277 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.74□□□□□ -0.37
CMC4P56277 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.73□□□□□ -0.37
CMC4P56277 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.73□□□□□ -0.37
CMC4P56277 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.73□□□□□ -0.37
CMC4P56277 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CMC4P56277 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.73□□□□□ -0.37
CMC4P56277 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.73□□□□□ -0.37
CMC4P56277 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 AC243591.1-201ENST00000452967 1364 ntBASIC12.73□□□□□ -0.37
CMC4P56277 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.73□□□□□ -0.37
CMC4P56277 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.73□□□□□ -0.37
CMC4P56277 AL591424.1-201ENST00000442569 1213 ntBASIC12.73□□□□□ -0.37
CMC4P56277 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.73□□□□□ -0.37
CMC4P56277 PAWRP1-201ENST00000451083 565 ntBASIC12.73□□□□□ -0.37
CMC4P56277 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.73□□□□□ -0.37
CMC4P56277 AC145285.3-201ENST00000564603 959 ntBASIC12.73□□□□□ -0.37
CMC4P56277 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.73□□□□□ -0.37
CMC4P56277 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.73□□□□□ -0.37
CMC4P56277 AC010654.1-201ENST00000615722 808 ntBASIC12.73□□□□□ -0.37
CMC4P56277 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.73□□□□□ -0.37
CMC4P56277 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CMC4P56277 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.73□□□□□ -0.37
CMC4P56277 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.73□□□□□ -0.37
CMC4P56277 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CMC4P56277 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CMC4P56277 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.72□□□□□ -0.37
CMC4P56277 AP002414.3-201ENST00000589352 1468 ntBASIC12.72□□□□□ -0.37
CMC4P56277 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CMC4P56277 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.72□□□□□ -0.37
CMC4P56277 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.72□□□□□ -0.37
CMC4P56277 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.72□□□□□ -0.37
CMC4P56277 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CMC4P56277 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.72□□□□□ -0.37
CMC4P56277 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.72□□□□□ -0.37
CMC4P56277 RPL13AP23-201ENST00000480739 586 ntBASIC12.72□□□□□ -0.37
CMC4P56277 AC108751.1-201ENST00000490852 363 ntBASIC12.72□□□□□ -0.37
CMC4P56277 RNA5SP419-201ENST00000515908 135 ntBASIC12.72□□□□□ -0.37
CMC4P56277 IGHV3-22-201ENST00000520721 359 ntBASIC12.72□□□□□ -0.37
CMC4P56277 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.72□□□□□ -0.37
CMC4P56277 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.72□□□□□ -0.37
CMC4P56277 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 Z83851.2-201ENST00000609564 659 ntBASIC12.72□□□□□ -0.37
CMC4P56277 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.72□□□□□ -0.37
CMC4P56277 AP001350.2-201ENST00000625104 1094 ntBASIC12.72□□□□□ -0.37
CMC4P56277 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.72□□□□□ -0.37
CMC4P56277 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.72□□□□□ -0.37
CMC4P56277 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 AC067852.2-201ENST00000590513 2313 ntBASIC12.72□□□□□ -0.37
CMC4P56277 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
CMC4P56277 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CMC4P56277 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.72□□□□□ -0.37
CMC4P56277 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CMC4P56277 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CMC4P56277 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CMC4P56277 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 IL9RP2-201ENST00000423948 1312 ntBASIC12.71□□□□□ -0.37
CMC4P56277 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CMC4P56277 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.71□□□□□ -0.37
CMC4P56277 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
CMC4P56277 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CMC4P56277 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
CMC4P56277 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CMC4P56277 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CMC4P56277 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms