Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SH3BGRP55822 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
SH3BGRP55822 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.4■□□□□ 0.22
SH3BGRP55822 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.4■□□□□ 0.22
SH3BGRP55822 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 AC010203.1-204ENST00000548782 407 ntBASIC16.4■□□□□ 0.22
SH3BGRP55822 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SH3BGRP55822 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.4■□□□□ 0.22
SH3BGRP55822 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SH3BGRP55822 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.4■□□□□ 0.22
SH3BGRP55822 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.4■□□□□ 0.22
SH3BGRP55822 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.4■□□□□ 0.22
SH3BGRP55822 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.4■□□□□ 0.22
SH3BGRP55822 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 AL662844.4-201ENST00000606367 2838 ntBASIC16.4■□□□□ 0.22
SH3BGRP55822 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 AC006058.4-201ENST00000624016 1670 ntBASIC16.4■□□□□ 0.22
SH3BGRP55822 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH3BGRP55822 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SH3BGRP55822 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
SH3BGRP55822 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.39■□□□□ 0.22
SH3BGRP55822 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SH3BGRP55822 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.39■□□□□ 0.21
SH3BGRP55822 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.39■□□□□ 0.21
SH3BGRP55822 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 HOXB1-202ENST00000577092 1414 ntBASIC16.39■□□□□ 0.21
SH3BGRP55822 AC073508.3-201ENST00000619697 1419 ntBASIC16.39■□□□□ 0.21
SH3BGRP55822 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.39■□□□□ 0.21
SH3BGRP55822 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SH3BGRP55822 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SH3BGRP55822 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 AP000593.1-201ENST00000393668 712 ntBASIC16.39■□□□□ 0.21
SH3BGRP55822 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.39■□□□□ 0.21
SH3BGRP55822 AC009947.2-201ENST00000444014 672 ntBASIC16.39■□□□□ 0.21
SH3BGRP55822 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.39■□□□□ 0.21
SH3BGRP55822 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.39■□□□□ 0.21
SH3BGRP55822 KRT18P41-201ENST00000518924 1277 ntBASIC16.39■□□□□ 0.21
SH3BGRP55822 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.39■□□□□ 0.21
SH3BGRP55822 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.39■□□□□ 0.21
SH3BGRP55822 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.39■□□□□ 0.21
SH3BGRP55822 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.39■□□□□ 0.21
SH3BGRP55822 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SH3BGRP55822 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3BGRP55822 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3BGRP55822 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3BGRP55822 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3BGRP55822 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.38■□□□□ 0.21
SH3BGRP55822 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3BGRP55822 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SH3BGRP55822 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3BGRP55822 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3BGRP55822 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
SH3BGRP55822 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms