Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PDE1AP54750 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
PDE1AP54750 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.86■□□□□ 0.93
PDE1AP54750 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.86■□□□□ 0.93
PDE1AP54750 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.86■□□□□ 0.93
PDE1AP54750 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.86■□□□□ 0.93
PDE1AP54750 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 AC073648.2-201ENST00000510116 352 ntBASIC20.86■□□□□ 0.93
PDE1AP54750 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PDE1AP54750 KRT126P-201ENST00000549467 1181 ntBASIC20.86■□□□□ 0.93
PDE1AP54750 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
PDE1AP54750 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.86■□□□□ 0.93
PDE1AP54750 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.86■□□□□ 0.93
PDE1AP54750 AL805961.1-202ENST00000641562 540 ntBASIC20.86■□□□□ 0.93
PDE1AP54750 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDE1AP54750 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE1AP54750 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDE1AP54750 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.85■□□□□ 0.93
PDE1AP54750 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.85■□□□□ 0.93
PDE1AP54750 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE1AP54750 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.85■□□□□ 0.93
PDE1AP54750 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.85■□□□□ 0.93
PDE1AP54750 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE1AP54750 AC012640.2-201ENST00000561606 901 ntBASIC20.85■□□□□ 0.93
PDE1AP54750 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDE1AP54750 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE1AP54750 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE1AP54750 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PDE1AP54750 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
PDE1AP54750 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE1AP54750 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE1AP54750 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE1AP54750 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
PDE1AP54750 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE1AP54750 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PDE1AP54750 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE1AP54750 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE1AP54750 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE1AP54750 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE1AP54750 KRT18P67-201ENST00000432816 1264 ntBASIC20.84■□□□□ 0.93
PDE1AP54750 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.84■□□□□ 0.93
PDE1AP54750 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE1AP54750 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PDE1AP54750 AC008735.5-201ENST00000623544 497 ntBASIC20.84■□□□□ 0.93
PDE1AP54750 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDE1AP54750 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE1AP54750 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDE1AP54750 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDE1AP54750 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.84■□□□□ 0.93
PDE1AP54750 PCDHA14-201ENST00000506751 2298 ntBASIC20.84■□□□□ 0.93
PDE1AP54750 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDE1AP54750 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PDE1AP54750 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE1AP54750 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.84■□□□□ 0.93
PDE1AP54750 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE1AP54750 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PDE1AP54750 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE1AP54750 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PDE1AP54750 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.83■□□□□ 0.93
PDE1AP54750 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PDE1AP54750 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE1AP54750 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.83■□□□□ 0.93
PDE1AP54750 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE1AP54750 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE1AP54750 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.83■□□□□ 0.93
PDE1AP54750 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE1AP54750 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PDE1AP54750 AC004870.1-201ENST00000315132 882 ntBASIC20.83■□□□□ 0.93
PDE1AP54750 AC087163.2-201ENST00000457299 853 ntBASIC20.83■□□□□ 0.93
PDE1AP54750 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.83■□□□□ 0.93
PDE1AP54750 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.83■□□□□ 0.93
PDE1AP54750 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE1AP54750 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE1AP54750 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
PDE1AP54750 KRT8P49-201ENST00000604166 1432 ntBASIC20.83■□□□□ 0.93
PDE1AP54750 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDE1AP54750 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDE1AP54750 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms