Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HLCSP50747 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.4■□□□□ 0.22
HLCSP50747 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.4■□□□□ 0.22
HLCSP50747 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.4■□□□□ 0.22
HLCSP50747 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.4■□□□□ 0.22
HLCSP50747 AC106795.1-205ENST00000512851 1056 ntBASIC16.4■□□□□ 0.22
HLCSP50747 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.4■□□□□ 0.22
HLCSP50747 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.4■□□□□ 0.22
HLCSP50747 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.4■□□□□ 0.22
HLCSP50747 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.4■□□□□ 0.22
HLCSP50747 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HLCSP50747 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HLCSP50747 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HLCSP50747 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 AC060834.1-201ENST00000443027 2032 ntBASIC16.4■□□□□ 0.22
HLCSP50747 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLCSP50747 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
HLCSP50747 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.39■□□□□ 0.22
HLCSP50747 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.39■□□□□ 0.22
HLCSP50747 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLCSP50747 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.39■□□□□ 0.21
HLCSP50747 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HLCSP50747 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.39■□□□□ 0.21
HLCSP50747 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.39■□□□□ 0.21
HLCSP50747 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.39■□□□□ 0.21
HLCSP50747 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.39■□□□□ 0.21
HLCSP50747 RBM17P3-201ENST00000417687 1192 ntBASIC16.39■□□□□ 0.21
HLCSP50747 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.39■□□□□ 0.21
HLCSP50747 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.39■□□□□ 0.21
HLCSP50747 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 AC064862.7-201ENST00000604520 867 ntBASIC16.39■□□□□ 0.21
HLCSP50747 AC008608.2-201ENST00000606089 416 ntBASIC16.39■□□□□ 0.21
HLCSP50747 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.39■□□□□ 0.21
HLCSP50747 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.39■□□□□ 0.21
HLCSP50747 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
HLCSP50747 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.39■□□□□ 0.21
HLCSP50747 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.39■□□□□ 0.21
HLCSP50747 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.39■□□□□ 0.21
HLCSP50747 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.39■□□□□ 0.21
HLCSP50747 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLCSP50747 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.38■□□□□ 0.21
HLCSP50747 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLCSP50747 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
HLCSP50747 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
HLCSP50747 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HLCSP50747 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLCSP50747 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLCSP50747 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLCSP50747 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLCSP50747 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLCSP50747 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HLCSP50747 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HLCSP50747 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.38■□□□□ 0.21
HLCSP50747 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLCSP50747 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.38■□□□□ 0.21
HLCSP50747 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HLCSP50747 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.38■□□□□ 0.21
HLCSP50747 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLCSP50747 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.38■□□□□ 0.21
HLCSP50747 FAM220CP-201ENST00000395253 831 ntBASIC16.38■□□□□ 0.21
HLCSP50747 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.38■□□□□ 0.21
HLCSP50747 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HLCSP50747 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms