Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
PTPN7P35236 AL021920.2-201ENST00000624828 1351 ntBASIC17.69■□□□□ 0.42
PTPN7P35236 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN7P35236 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN7P35236 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN7P35236 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN7P35236 NUS1P2-201ENST00000417358 873 ntBASIC17.69■□□□□ 0.42
PTPN7P35236 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN7P35236 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 AC106795.1-205ENST00000512851 1056 ntBASIC17.69■□□□□ 0.42
PTPN7P35236 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN7P35236 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PTPN7P35236 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN7P35236 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN7P35236 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 AL591684.3-201ENST00000605187 298 ntBASIC17.69■□□□□ 0.42
PTPN7P35236 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
PTPN7P35236 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN7P35236 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN7P35236 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN7P35236 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN7P35236 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN7P35236 TNRC18P3-201ENST00000441896 2691 ntBASIC17.68■□□□□ 0.42
PTPN7P35236 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTPN7P35236 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PTPN7P35236 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN7P35236 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN7P35236 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPN7P35236 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPN7P35236 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.68■□□□□ 0.42
PTPN7P35236 AP001269.4-201ENST00000609611 512 ntBASIC17.68■□□□□ 0.42
PTPN7P35236 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
PTPN7P35236 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PTPN7P35236 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTPN7P35236 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PTPN7P35236 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN7P35236 AL590787.1-201ENST00000568856 1315 ntBASIC17.68■□□□□ 0.42
PTPN7P35236 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN7P35236 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN7P35236 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN7P35236 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PTPN7P35236 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPN7P35236 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PTPN7P35236 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PTPN7P35236 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTPN7P35236 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 TERC-201ENST00000602385 541 ntBASIC17.67■□□□□ 0.42
PTPN7P35236 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 AC092171.3-201ENST00000610122 2651 ntBASIC17.67■□□□□ 0.42
PTPN7P35236 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PTPN7P35236 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTPN7P35236 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN7P35236 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN7P35236 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN7P35236 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN7P35236 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN7P35236 KRT8P49-201ENST00000604166 1432 ntBASIC17.66■□□□□ 0.42
PTPN7P35236 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms