Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COL11A2P13942 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 RN7SL837P-201ENST00000463010 287 ntBASIC20.61■□□□□ 0.89
COL11A2P13942 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 AC008494.3-201ENST00000606615 944 ntBASIC20.61■□□□□ 0.89
COL11A2P13942 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.61■□□□□ 0.89
COL11A2P13942 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.61■□□□□ 0.89
COL11A2P13942 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL11A2P13942 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.61■□□□□ 0.89
COL11A2P13942 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL11A2P13942 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 ABALON-201ENST00000629058 1903 ntBASIC20.6■□□□□ 0.89
COL11A2P13942 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.6■□□□□ 0.89
COL11A2P13942 RNA5SP410-201ENST00000516285 106 ntBASIC20.6■□□□□ 0.89
COL11A2P13942 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.6■□□□□ 0.89
COL11A2P13942 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 SNX29P1-201ENST00000548357 1007 ntBASIC20.6■□□□□ 0.89
COL11A2P13942 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.6■□□□□ 0.89
COL11A2P13942 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.6■□□□□ 0.89
COL11A2P13942 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.6■□□□□ 0.89
COL11A2P13942 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
COL11A2P13942 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COL11A2P13942 SLC7A15P-201ENST00000424028 1363 ntBASIC20.6■□□□□ 0.89
COL11A2P13942 AL035456.1-201ENST00000456064 1369 ntBASIC20.6■□□□□ 0.89
COL11A2P13942 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL11A2P13942 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
COL11A2P13942 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.59■□□□□ 0.89
COL11A2P13942 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.59■□□□□ 0.89
COL11A2P13942 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COL11A2P13942 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.59■□□□□ 0.89
COL11A2P13942 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.59■□□□□ 0.89
COL11A2P13942 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.59■□□□□ 0.89
COL11A2P13942 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.59■□□□□ 0.89
COL11A2P13942 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.59■□□□□ 0.89
COL11A2P13942 RN7SL828P-201ENST00000607615 303 ntBASIC20.59■□□□□ 0.89
COL11A2P13942 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.59■□□□□ 0.89
COL11A2P13942 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
COL11A2P13942 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COL11A2P13942 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.59■□□□□ 0.89
COL11A2P13942 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.59■□□□□ 0.89
COL11A2P13942 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.59■□□□□ 0.89
COL11A2P13942 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL11A2P13942 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
COL11A2P13942 AC104581.1-202ENST00000635932 2618 ntBASIC20.59■□□□□ 0.89
COL11A2P13942 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL11A2P13942 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL11A2P13942 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COL11A2P13942 AL512384.1-201ENST00000406683 331 ntBASIC20.58■□□□□ 0.89
COL11A2P13942 DFFBP1-201ENST00000433250 979 ntBASIC20.58■□□□□ 0.89
COL11A2P13942 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
COL11A2P13942 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL11A2P13942 AC135586.1-201ENST00000539323 574 ntBASIC20.58■□□□□ 0.89
COL11A2P13942 AL079307.3-201ENST00000556114 283 ntBASIC20.58■□□□□ 0.89
COL11A2P13942 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.58■□□□□ 0.89
COL11A2P13942 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COL11A2P13942 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL11A2P13942 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.58■□□□□ 0.89
COL11A2P13942 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL11A2P13942 AC116353.5-201ENST00000638148 1699 ntBASIC20.58■□□□□ 0.89
COL11A2P13942 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.58■□□□□ 0.89
COL11A2P13942 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL11A2P13942 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL11A2P13942 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL11A2P13942 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL11A2P13942 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL11A2P13942 AC112492.5-201ENST00000421897 457 ntBASIC20.58■□□□□ 0.88
COL11A2P13942 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.58■□□□□ 0.88
COL11A2P13942 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
COL11A2P13942 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
COL11A2P13942 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
COL11A2P13942 AP001350.2-201ENST00000625104 1094 ntBASIC20.58■□□□□ 0.88
COL11A2P13942 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.58■□□□□ 0.88
COL11A2P13942 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
COL11A2P13942 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms