Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF4O60810 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF4O60810 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF4O60810 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 UBALD1-205ENST00000590891 2641 ntBASIC16.44■□□□□ 0.22
PRAMEF4O60810 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF4O60810 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 PTCHD3P3-201ENST00000403073 906 ntBASIC16.44■□□□□ 0.22
PRAMEF4O60810 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF4O60810 RPS2P1-201ENST00000434010 821 ntBASIC16.44■□□□□ 0.22
PRAMEF4O60810 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 PAWRP1-201ENST00000451083 565 ntBASIC16.44■□□□□ 0.22
PRAMEF4O60810 SCARNA2-201ENST00000458748 420 ntBASIC16.44■□□□□ 0.22
PRAMEF4O60810 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 AC148477.8-201ENST00000624298 468 ntBASIC16.44■□□□□ 0.22
PRAMEF4O60810 AC107918.4-202ENST00000641623 219 ntBASIC16.44■□□□□ 0.22
PRAMEF4O60810 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF4O60810 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF4O60810 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF4O60810 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRAMEF4O60810 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PRAMEF4O60810 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.43■□□□□ 0.22
PRAMEF4O60810 KRT18P27-201ENST00000427733 1299 ntBASIC16.43■□□□□ 0.22
PRAMEF4O60810 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 RNPS1P1-201ENST00000507437 918 ntBASIC16.43■□□□□ 0.22
PRAMEF4O60810 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 AL121912.1-201ENST00000603683 238 ntBASIC16.43■□□□□ 0.22
PRAMEF4O60810 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.43■□□□□ 0.22
PRAMEF4O60810 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRAMEF4O60810 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 AC073621.1-201ENST00000392730 636 ntBASIC16.42■□□□□ 0.22
PRAMEF4O60810 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 AC018712.1-201ENST00000455767 687 ntBASIC16.42■□□□□ 0.22
PRAMEF4O60810 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms