Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC139887.3-201ENST00000568585 713 ntBASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.8□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AL118508.1-201ENST00000613502 2345 ntBASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RNA5SP419-201ENST00000515908 135 ntBASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SART3-203ENST00000546611 1184 ntBASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC021087.4-201ENST00000563761 564 ntBASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AL139288.1-201ENST00000623748 933 ntBASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 FAM215A-202ENST00000632077 792 ntBASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AC096633.1-201ENST00000422446 749 ntBASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 RPS2P1-201ENST00000434010 821 ntBASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 OR7E14P-202ENST00000530490 1290 ntBASIC13.78□□□□□ -0.2
TCRBV4S1A1TA0A5B7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms