Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 REXO1L3P-201ENST00000622202 1288 ntBASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 AC135050.7-201ENST00000624508 2218 ntBASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NCKAP1Q9Y2A7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 AC133963.1-201ENST00000504166 1679 ntBASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 AL390961.4-201ENST00000623958 2535 ntBASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 AC002056.1-201ENST00000395613 760 ntBASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 AL645728.2-201ENST00000641974 660 ntBASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1Q9Y2A7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 OR6D1P-203ENST00000641209 4860 ntBASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 AC004835.2-201ENST00000603762 682 ntBASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 AC092902.6-201ENST00000641783 218 ntBASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 AL355312.1-201ENST00000407115 2176 ntBASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1Q9Y2A7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1Q9Y2A7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms