Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 AC007950.2-201ENST00000615045 2347 ntBASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 KRT18P65-201ENST00000439811 1286 ntBASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 RBM17P1-201ENST00000453646 1190 ntBASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 AC113404.2-201ENST00000507884 177 ntBASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 C2orf69P3-201ENST00000565542 1120 ntBASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 MIR3917-201ENST00000580971 93 ntBASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 AC010653.2-201ENST00000623505 997 ntBASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 AC046185.3-201ENST00000623228 1824 ntBASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 KRT8P47-201ENST00000604727 1398 ntBASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SND1-IT1Q9HBX3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 LINC01311-201ENST00000565162 1445 ntBASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 AC097376.2-205ENST00000610159 5334 ntBASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SND1-IT1Q9HBX3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 SBF1P1-201ENST00000444527 5631 ntBASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 PVRIG2P-201ENST00000435460 978 ntBASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 UBE2SP1-201ENST00000450587 669 ntBASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 AC142381.4-202ENST00000563973 229 ntBASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 ITM2C-210ENST00000620962 501 ntBASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms