Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
RNF43Q68DV7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 GPX1P2-201ENST00000429271 606 ntBASIC18■□□□□ 0.47
RNF43Q68DV7 AL591424.1-201ENST00000442569 1213 ntBASIC18■□□□□ 0.47
RNF43Q68DV7 BX005266.1-201ENST00000473402 457 ntBASIC18■□□□□ 0.47
RNF43Q68DV7 IGHV3-22-201ENST00000520721 359 ntBASIC18■□□□□ 0.47
RNF43Q68DV7 OR7E14P-202ENST00000530490 1290 ntBASIC18■□□□□ 0.47
RNF43Q68DV7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18■□□□□ 0.47
RNF43Q68DV7 AC109462.3-201ENST00000573934 613 ntBASIC18■□□□□ 0.47
RNF43Q68DV7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF43Q68DV7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 AC148477.5-201ENST00000625164 1645 ntBASIC18■□□□□ 0.47
RNF43Q68DV7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18■□□□□ 0.47
RNF43Q68DV7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18■□□□□ 0.47
RNF43Q68DV7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF43Q68DV7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18■□□□□ 0.47
RNF43Q68DV7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
RNF43Q68DV7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF43Q68DV7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 REXO1L11P-201ENST00000620964 1927 ntBASIC17.98■□□□□ 0.47
RNF43Q68DV7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 DNAJB3-201ENST00000446806 729 ntBASIC17.98■□□□□ 0.47
RNF43Q68DV7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF43Q68DV7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF43Q68DV7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms