Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.39■□□□□ 0.85
PDS5AQ29RF7 AC108860.2-201ENST00000562760 2183 ntBASIC20.39■□□□□ 0.85
PDS5AQ29RF7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 TIMM8BP1-201ENST00000452384 211 ntBASIC20.38■□□□□ 0.85
PDS5AQ29RF7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 AC079140.1-201ENST00000508039 487 ntBASIC20.38■□□□□ 0.85
PDS5AQ29RF7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 CYP2A7P1-201ENST00000595391 815 ntBASIC20.38■□□□□ 0.85
PDS5AQ29RF7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 PCDHB18P-201ENST00000524813 2368 ntBASIC20.38■□□□□ 0.85
PDS5AQ29RF7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDS5AQ29RF7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 AC013467.2-201ENST00000605472 835 ntBASIC20.37■□□□□ 0.85
PDS5AQ29RF7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 WASH6P-202ENST00000359512 1437 ntBASIC20.37■□□□□ 0.85
PDS5AQ29RF7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PDS5AQ29RF7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 LINC00895-201ENST00000629028 1637 ntBASIC20.36■□□□□ 0.85
PDS5AQ29RF7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PDS5AQ29RF7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms