Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.91■□□□□ 0.3
SRP54P61011 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.91■□□□□ 0.3
SRP54P61011 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SRP54P61011 AC004877.2-201ENST00000623941 599 ntBASIC16.91■□□□□ 0.3
SRP54P61011 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP54P61011 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP54P61011 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.91■□□□□ 0.3
SRP54P61011 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SRP54P61011 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SRP54P61011 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
SRP54P61011 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SRP54P61011 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 PAWRP1-201ENST00000451083 565 ntBASIC16.9■□□□□ 0.3
SRP54P61011 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.9■□□□□ 0.3
SRP54P61011 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
SRP54P61011 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.9■□□□□ 0.3
SRP54P61011 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.9■□□□□ 0.3
SRP54P61011 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.9■□□□□ 0.3
SRP54P61011 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.9■□□□□ 0.3
SRP54P61011 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.9■□□□□ 0.3
SRP54P61011 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
SRP54P61011 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.9■□□□□ 0.3
SRP54P61011 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 AC008764.6-201ENST00000595909 2069 ntBASIC16.9■□□□□ 0.3
SRP54P61011 CROCCP1-201ENST00000426910 5675 ntBASIC16.9■□□□□ 0.3
SRP54P61011 BCAR1-209ENST00000546196 1340 ntBASIC16.9■□□□□ 0.3
SRP54P61011 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.9■□□□□ 0.3
SRP54P61011 AC106820.2-201ENST00000563775 3264 ntBASIC16.9■□□□□ 0.3
SRP54P61011 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SRP54P61011 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SRP54P61011 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
SRP54P61011 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SRP54P61011 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SRP54P61011 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SRP54P61011 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SRP54P61011 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.89■□□□□ 0.29
SRP54P61011 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP54P61011 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.89■□□□□ 0.29
SRP54P61011 RHOQP3-201ENST00000437982 621 ntBASIC16.89■□□□□ 0.29
SRP54P61011 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 CXCL1P1-201ENST00000502804 216 ntBASIC16.89■□□□□ 0.29
SRP54P61011 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP54P61011 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.89■□□□□ 0.29
SRP54P61011 AC005829.1-201ENST00000570002 483 ntBASIC16.89■□□□□ 0.29
SRP54P61011 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
SRP54P61011 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SRP54P61011 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SRP54P61011 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.89■□□□□ 0.29
SRP54P61011 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.88■□□□□ 0.29
SRP54P61011 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SRP54P61011 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.88■□□□□ 0.29
SRP54P61011 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SRP54P61011 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP54P61011 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SRP54P61011 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP54P61011 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP54P61011 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP54P61011 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP54P61011 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP54P61011 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SRP54P61011 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP54P61011 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SRP54P61011 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP54P61011 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.88■□□□□ 0.29
SRP54P61011 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP54P61011 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SRP54P61011 RPS8P6-201ENST00000426177 609 ntBASIC16.88■□□□□ 0.29
SRP54P61011 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SRP54P61011 AC004967.1-201ENST00000453589 447 ntBASIC16.88■□□□□ 0.29
SRP54P61011 AC092183.1-201ENST00000469884 875 ntBASIC16.88■□□□□ 0.29
SRP54P61011 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms