Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.09■□□□□ 0.17
SMSP52788 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SMSP52788 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SMSP52788 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.09■□□□□ 0.17
SMSP52788 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.09■□□□□ 0.17
SMSP52788 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.09■□□□□ 0.17
SMSP52788 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.09■□□□□ 0.17
SMSP52788 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.09■□□□□ 0.17
SMSP52788 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SMSP52788 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SMSP52788 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 AC243591.1-201ENST00000452967 1364 ntBASIC16.09■□□□□ 0.17
SMSP52788 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.09■□□□□ 0.17
SMSP52788 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SMSP52788 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.09■□□□□ 0.17
SMSP52788 TP73-AS1-210ENST00000637775 1455 ntBASIC16.09■□□□□ 0.17
SMSP52788 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.09■□□□□ 0.17
SMSP52788 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMSP52788 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.09■□□□□ 0.17
SMSP52788 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.09■□□□□ 0.17
SMSP52788 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SMSP52788 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMSP52788 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.08■□□□□ 0.17
SMSP52788 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.17
SMSP52788 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMSP52788 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.08■□□□□ 0.17
SMSP52788 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
SMSP52788 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SMSP52788 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SMSP52788 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 RCN1P2-201ENST00000398357 915 ntBASIC16.08■□□□□ 0.16
SMSP52788 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.08■□□□□ 0.16
SMSP52788 KRT18P65-201ENST00000439811 1286 ntBASIC16.08■□□□□ 0.16
SMSP52788 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.08■□□□□ 0.16
SMSP52788 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.08■□□□□ 0.16
SMSP52788 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.08■□□□□ 0.16
SMSP52788 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 FAM215A-202ENST00000632077 792 ntBASIC16.08■□□□□ 0.16
SMSP52788 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.08■□□□□ 0.16
SMSP52788 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.08■□□□□ 0.16
SMSP52788 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SMSP52788 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
SMSP52788 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.08■□□□□ 0.16
SMSP52788 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.08■□□□□ 0.16
SMSP52788 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.08■□□□□ 0.16
SMSP52788 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMSP52788 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SMSP52788 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.07■□□□□ 0.16
SMSP52788 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SMSP52788 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SMSP52788 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.07■□□□□ 0.16
SMSP52788 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.07■□□□□ 0.16
SMSP52788 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.07■□□□□ 0.16
SMSP52788 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.07■□□□□ 0.16
SMSP52788 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.07■□□□□ 0.16
SMSP52788 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.07■□□□□ 0.16
SMSP52788 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SMSP52788 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.07■□□□□ 0.16
SMSP52788 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMSP52788 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms