Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RPA3P35244 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RPA3P35244 UPK3BP1-201ENST00000428678 509 ntBASIC17.36■□□□□ 0.37
RPA3P35244 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.36■□□□□ 0.37
RPA3P35244 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RPA3P35244 AC093458.2-201ENST00000623150 629 ntBASIC17.36■□□□□ 0.37
RPA3P35244 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RPA3P35244 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.36■□□□□ 0.37
RPA3P35244 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RPA3P35244 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 AC132872.4-202ENST00000622924 2756 ntBASIC17.36■□□□□ 0.37
RPA3P35244 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPA3P35244 CYP2T1P-202ENST00000641596 2535 ntBASIC17.36■□□□□ 0.37
RPA3P35244 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.35■□□□□ 0.37
RPA3P35244 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 MTCL1P1-201ENST00000446207 792 ntBASIC17.35■□□□□ 0.37
RPA3P35244 AC068472.1-201ENST00000474589 881 ntBASIC17.35■□□□□ 0.37
RPA3P35244 AC002558.1-201ENST00000488906 803 ntBASIC17.35■□□□□ 0.37
RPA3P35244 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.35■□□□□ 0.37
RPA3P35244 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.35■□□□□ 0.37
RPA3P35244 KRT18P1-202ENST00000452408 1331 ntBASIC17.35■□□□□ 0.37
RPA3P35244 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.35■□□□□ 0.37
RPA3P35244 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RPA3P35244 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RPA3P35244 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.35■□□□□ 0.37
RPA3P35244 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RPA3P35244 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPA3P35244 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPA3P35244 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.35■□□□□ 0.37
RPA3P35244 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.35■□□□□ 0.37
RPA3P35244 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
RPA3P35244 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RPA3P35244 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
RPA3P35244 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPA3P35244 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RPA3P35244 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RPA3P35244 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.34■□□□□ 0.37
RPA3P35244 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.34■□□□□ 0.37
RPA3P35244 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RPA3P35244 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RPA3P35244 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.34■□□□□ 0.37
RPA3P35244 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RPA3P35244 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 AC011840.4-201ENST00000578471 627 ntBASIC17.34■□□□□ 0.37
RPA3P35244 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.34■□□□□ 0.37
RPA3P35244 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.34■□□□□ 0.37
RPA3P35244 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.34■□□□□ 0.37
RPA3P35244 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RPA3P35244 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.34■□□□□ 0.37
RPA3P35244 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RPA3P35244 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RPA3P35244 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
RPA3P35244 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPA3P35244 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPA3P35244 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.33■□□□□ 0.37
RPA3P35244 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.33■□□□□ 0.37
RPA3P35244 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPA3P35244 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.33■□□□□ 0.37
RPA3P35244 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms