Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR3DP05423 UPF3AP3-201ENST00000420996 769 ntBASIC20.47■□□□□ 0.87
POLR3DP05423 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR3DP05423 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR3DP05423 DNAJB3-201ENST00000446806 729 ntBASIC20.47■□□□□ 0.87
POLR3DP05423 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR3DP05423 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR3DP05423 MIR3687-2-201ENST00000577708 61 ntBASIC20.47■□□□□ 0.87
POLR3DP05423 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR3DP05423 MIR3687-1-201ENST00000614492 61 ntBASIC20.47■□□□□ 0.87
POLR3DP05423 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.47■□□□□ 0.87
POLR3DP05423 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR3DP05423 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
POLR3DP05423 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
POLR3DP05423 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
POLR3DP05423 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR3DP05423 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR3DP05423 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
POLR3DP05423 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
POLR3DP05423 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR3DP05423 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR3DP05423 PKD1P1-201ENST00000458669 6805 ntBASIC20.46■□□□□ 0.87
POLR3DP05423 AC080080.1-201ENST00000625121 2420 ntBASIC20.46■□□□□ 0.87
POLR3DP05423 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR3DP05423 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR3DP05423 IGLL3P-201ENST00000412472 434 ntBASIC20.46■□□□□ 0.87
POLR3DP05423 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.46■□□□□ 0.87
POLR3DP05423 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR3DP05423 AC112482.1-201ENST00000492080 688 ntBASIC20.46■□□□□ 0.87
POLR3DP05423 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.46■□□□□ 0.87
POLR3DP05423 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR3DP05423 OR7E47P-204ENST00000575924 449 ntBASIC20.46■□□□□ 0.87
POLR3DP05423 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR3DP05423 AC092865.6-201ENST00000642101 219 ntBASIC20.46■□□□□ 0.87
POLR3DP05423 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
POLR3DP05423 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR3DP05423 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
POLR3DP05423 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR3DP05423 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR3DP05423 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR3DP05423 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR3DP05423 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR3DP05423 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
POLR3DP05423 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR3DP05423 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR3DP05423 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
POLR3DP05423 RPSAP43-201ENST00000402237 625 ntBASIC20.45■□□□□ 0.86
POLR3DP05423 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.45■□□□□ 0.86
POLR3DP05423 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.45■□□□□ 0.86
POLR3DP05423 GPX1P2-201ENST00000429271 606 ntBASIC20.45■□□□□ 0.86
POLR3DP05423 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR3DP05423 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.45■□□□□ 0.86
POLR3DP05423 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR3DP05423 MTDHP5-201ENST00000598980 586 ntBASIC20.45■□□□□ 0.86
POLR3DP05423 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
POLR3DP05423 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
POLR3DP05423 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR3DP05423 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
POLR3DP05423 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR3DP05423 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR3DP05423 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR3DP05423 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR3DP05423 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
POLR3DP05423 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR3DP05423 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
POLR3DP05423 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR3DP05423 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR3DP05423 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR3DP05423 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR3DP05423 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
POLR3DP05423 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR3DP05423 AC055717.3-201ENST00000622967 595 ntBASIC20.44■□□□□ 0.86
POLR3DP05423 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
POLR3DP05423 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR3DP05423 AC002310.6-201ENST00000624451 1377 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms