Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.38■□□□□ 0.85
MBD4O95243 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MBD4O95243 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.38■□□□□ 0.85
MBD4O95243 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD4O95243 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MBD4O95243 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD4O95243 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MBD4O95243 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD4O95243 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
MBD4O95243 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.37■□□□□ 0.85
MBD4O95243 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
MBD4O95243 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
MBD4O95243 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
MBD4O95243 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
MBD4O95243 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
MBD4O95243 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
MBD4O95243 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD4O95243 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD4O95243 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.37■□□□□ 0.85
MBD4O95243 AL513480.1-201ENST00000451731 511 ntBASIC20.37■□□□□ 0.85
MBD4O95243 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.37■□□□□ 0.85
MBD4O95243 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.37■□□□□ 0.85
MBD4O95243 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD4O95243 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
MBD4O95243 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD4O95243 PDPK2P-202ENST00000562415 1191 ntBASIC20.37■□□□□ 0.85
MBD4O95243 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 AC023141.13-201ENST00000604991 943 ntBASIC20.37■□□□□ 0.85
MBD4O95243 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.37■□□□□ 0.85
MBD4O95243 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD4O95243 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD4O95243 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MBD4O95243 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MBD4O95243 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD4O95243 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD4O95243 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.36■□□□□ 0.85
MBD4O95243 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
MBD4O95243 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
MBD4O95243 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD4O95243 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.36■□□□□ 0.85
MBD4O95243 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
MBD4O95243 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.36■□□□□ 0.85
MBD4O95243 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.36■□□□□ 0.85
MBD4O95243 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.36■□□□□ 0.85
MBD4O95243 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
MBD4O95243 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
MBD4O95243 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD4O95243 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
MBD4O95243 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD4O95243 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.35■□□□□ 0.85
MBD4O95243 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
MBD4O95243 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD4O95243 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 MCCD1P2-201ENST00000423228 335 ntBASIC20.35■□□□□ 0.85
MBD4O95243 GPX1P2-201ENST00000429271 606 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms