Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX49Q9Y6V7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 AL162727.3-201ENST00000635661 2787 ntBASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 AC106795.1-205ENST00000512851 1056 ntBASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
DDX49Q9Y6V7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
DDX49Q9Y6V7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
DDX49Q9Y6V7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DDX49Q9Y6V7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DDX49Q9Y6V7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 SAPCD2P3-201ENST00000455031 850 ntBASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 AC132938.6-201ENST00000623828 1655 ntBASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
DDX49Q9Y6V7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 RCN1P2-201ENST00000398357 915 ntBASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 AC068472.1-201ENST00000474589 881 ntBASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 VENTXP7-201ENST00000475503 772 ntBASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 RNA5SP419-201ENST00000515908 135 ntBASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 MIR5100-201ENST00000579544 119 ntBASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 AC060834.1-201ENST00000443027 2032 ntBASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX49Q9Y6V7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms