Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 AL135999.2-201ENST00000622438 1686 ntBASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 AC073648.2-201ENST00000510116 352 ntBASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 AC004817.3-201ENST00000602957 2129 ntBASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 AC064862.7-201ENST00000604520 867 ntBASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 AC025062.2-201ENST00000605477 670 ntBASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 NKILA-202ENST00000614771 2598 ntBASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PPARGC1AQ9UBK2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 KRT18P67-201ENST00000432816 1264 ntBASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 AC018712.1-201ENST00000455767 687 ntBASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 RNPS1P1-201ENST00000507437 918 ntBASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 AL589182.2-201ENST00000619332 1049 ntBASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 AC011676.5-201ENST00000624864 2660 ntBASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PPARGC1AQ9UBK2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 ACTG1P4-201ENST00000425123 1122 ntBASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.89■□□□□ 0.45
PPARGC1AQ9UBK2 AF186996.4-201ENST00000467186 377 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms