Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 AC092910.1-201ENST00000482027 1129 ntBASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 AC136632.2-201ENST00000512891 861 ntBASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 PGM5P2-202ENST00000637225 1043 ntBASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 AC243591.1-201ENST00000452967 1364 ntBASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRDM9Q9NQV7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 AL590627.1-203ENST00000421194 1026 ntBASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 AL356488.2-201ENST00000602755 427 ntBASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 BX640515.1-201ENST00000617215 977 ntBASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 AP002414.3-201ENST00000589352 1468 ntBASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRDM9Q9NQV7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 AC073621.1-201ENST00000392730 636 ntBASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 ELK2BP-201ENST00000415014 1224 ntBASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 AC005593.1-201ENST00000624894 515 ntBASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.21■□□□□ 0.19
PRDM9Q9NQV7 AC006504.4-201ENST00000592118 1568 ntBASIC16.21■□□□□ 0.18
PRDM9Q9NQV7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRDM9Q9NQV7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRDM9Q9NQV7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
PRDM9Q9NQV7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRDM9Q9NQV7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 IL9RP2-201ENST00000423948 1312 ntBASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRDM9Q9NQV7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms