Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HMG20AQ9NP66 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 SLC25A1P2-201ENST00000430693 912 ntBASIC15.65■□□□□ 0.1
HMG20AQ9NP66 TSPY7P-201ENST00000431358 1114 ntBASIC15.65■□□□□ 0.1
HMG20AQ9NP66 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 MIR4674-201ENST00000582457 87 ntBASIC15.65■□□□□ 0.1
HMG20AQ9NP66 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 AC067930.6-201ENST00000623257 4947 ntBASIC15.65■□□□□ 0.1
HMG20AQ9NP66 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 AC100803.2-201ENST00000562459 1963 ntBASIC15.65■□□□□ 0.1
HMG20AQ9NP66 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMG20AQ9NP66 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
HMG20AQ9NP66 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
HMG20AQ9NP66 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 TSPY17P-201ENST00000450329 467 ntBASIC15.64■□□□□ 0.09
HMG20AQ9NP66 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 AL023803.3-201ENST00000615559 522 ntBASIC15.64■□□□□ 0.09
HMG20AQ9NP66 AP006294.2-201ENST00000641667 209 ntBASIC15.64■□□□□ 0.09
HMG20AQ9NP66 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HMG20AQ9NP66 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms